Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09561 ATGCAAACTCCCCTAACTCACCAAGAACCTTCCTCAATGGGACTAAAAGAGTTGAAAGAATCAACTATTCATCTGGCATCGAGCATGAGAAGCATAAATAGTGCGGGCAATGAGTCAATATTTGATGTTGAGAAAGAAATTGATGAATTATTGCCTATTGAGGTTAAAGAACAACGAGTAAGCAACTTGCTTCAATCTTTAATGGTAGGAGGGTGTGTAGCAGCTATGCCTATCCTGAAAATGATTCCAACTTCTGTATTGTGGGGATATTTCGCTTTCATGGCCATTGAAAACTTACCTGGCAACCAGTTCTGGAAAAGAATTTTGCTCATTTTCACTGCGTCGGGCAAAAGATACAAAGTTATGGAGGAACACCATGCGACTTACGCAGAAACTGTGCCTTTCAAGATAATGGAGGCATTTACATTCTTCCAGACTGTATACTTGCTTGTTTGTTTTGGTATCACTTGGGTTCCAATTGCAGGTGTTCTGTTCCCATTGATGATAATGCTTCTCGTTCCTGTAAGACAGTACATTCTGCCCAAGTTCTTCACAGGTGCACACCTTCAAGATTTAGATGCTGCAGAATATGAAGAAATCCCAGCATTACCATTCGACCTATCTGCTGAAGGAGAGTTGAGCATGACAGGTTCCTTTGCAGATGAAGGAGAGATTCTGGATGGGATTATCACCAGAAGCCGCGGAGAGGTTAAACGAATTTACAATCCAAAGGTGGTGAGCTCCAGTGTAACACCGTCCAATGAGTTTACAAGTATTTCAAAGTCCATGGTTCCCAGATAA 801 0.4157 MQTPLTHQEPSSMGLKELKESTIHLASSMRSINSAGNESIFDVEKEIDELLPIEVKEQRVSNLLQSLMVGGCVAAMPILKMIPTSVLWGYFAFMAIENLPGNQFWKRILLIFTASGKRYKVMEEHHATYAETVPFKIMEAFTFFQTVYLLVCFGITWVPIAGVLFPLMIMLLVPVRQYILPKFFTGAHLQDLDAAEYEEIPALPFDLSAEGELSMTGSFADEGEILDGIITRSRGEVKRIYNPKVVSSSVTPSNEFTSISKSMVPR 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09561 266 Pfam HCO3- transporter family 53 143 IPR011531 GO:0006820|GO:0016020
Vifa1g09561 266 PANTHER ANION EXCHANGE PROTEIN 40 201 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09561 Vifa-Chr1 1531880908 1531882239 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09561 1 266 Antiporters AT2G47160 68.045 4.40e-124 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09561 K24194 - gmx:100795777 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09561 1 1531880908 1531882239 Vifa1g09561 1 1531880908 1531882239 ECH