Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09481 ATGAAAACTTTCTCCTCAATTCAACCACCCCATAGTTTCCATTCCGCACCATTTTTCTCTTCCACTCCCAAAAGGACTCAAGTTCCTTTCTCTGCAAGGGTCTTCTTTTGTCATGCAAAATCCGGAACAAATGAGTCATTAAACATAAAATTGTTGCCTCAAACCCTATTAATAGCAGAGAAAGAAGAAGCCAAGGCTGTATTAACCTTGTTTTTGAAGAAACAAGGTTTGAGCAATGCAAATGCAACAAAAACCATTAACCGATCAGATCCTTTTATTGATCATCTTATCTCAAAGCTTCACTCGAAGCACAAAACTTGGTACCTTTCAGGGAGAGAGCTTACGACTCTTGAAATCAGGGATGTACTTATCTCTTATCTTGAATCGCTTTTCGAAGAGCACGGACATATTCTAGTGGATGTAGTAGAAAACTATCCAAACCCACCTGTTAGGGATAAATCAGCCGAACCGATTCACCCTCCTAATCCTAGTCTAGTGGTTGAGTCCAAGAAACTTAAAGCCGTGTCAGAAGTGAGTGGGGTAGATCCTGCTGCGGGGAATCTTCGTCCTCATTTTGTTTATCTCATGCAACTTGGAATGGAAATTGACCAGATTAGGACTATTATACGGAAGTTCCCAGCTTTCGCAAACTATAGCTTGGATGGTAAAATTAAGCCGCTGGTCGAGTTTTTTCTTGAACTTGGAGTGCCACAAGAAAAAATTCTTATTATCATCTCGAAAAGGCCTCAATTATGTGGAATCAGTCTATCTGAAAATCTTAAGCCGACAATGGAATTCTTCGAATCTTTGGGTGTTGACAAGAAACAATGGGCGAAGGTGATTTACCGTTTCCCGGCCTTGCTAACTTATAGCAAGCAGAAGATTACTGAAAGTATAGCTTTTCTCCTTGAATTAGGCATCTCAGAAGAGAGCATTGGTAAGATCATAACTCGCTGCCCTAATATTATTAGTTATAGTGTAGAGGACAATCTCCGGCCGACAGCAATGTACTTCCGTTCCTTGGGGGTTGATGTTGGCCTTCTTCTATTCAAGTGTCCACAAAATTTTGGTCTCAGCATTGAGGCTAATATAAAGCCTGTAACCGAGTTTTTCTTGGAGAGGGGATACACTTCGGAAGAAATTGGCACTATGATTTCGAGATACGGACCATTGTACACTTTCAGCTTGACTGGGAATTTGATGCCAAAATGGGATTTCTTTTTGACTATGGGTTACCCTAAATCTGAGTTGGTTAAGTTCCCTCAATTTTTTGGATACAATTTGGAACGAAGGATTAAACCGAGATATGCGAGATATGCACGCGTGAAAAGTTATGGGGTGAAATTATTGCTGAATCAGGTTCTTTCACTATCAACCACCAAGTTTGAAGAGGTTCTTAAAAAGAAATTGAAGAAACTGCAAAATGAAGAAAATGAAGAAACTGTAAAATAA 1452 0.3974 MKTFSSIQPPHSFHSAPFFSSTPKRTQVPFSARVFFCHAKSGTNESLNIKLLPQTLLIAEKEEAKAVLTLFLKKQGLSNANATKTINRSDPFIDHLISKLHSKHKTWYLSGRELTTLEIRDVLISYLESLFEEHGHILVDVVENYPNPPVRDKSAEPIHPPNPSLVVESKKLKAVSEVSGVDPAAGNLRPHFVYLMQLGMEIDQIRTIIRKFPAFANYSLDGKIKPLVEFFLELGVPQEKILIIISKRPQLCGISLSENLKPTMEFFESLGVDKKQWAKVIYRFPALLTYSKQKITESIAFLLELGISEESIGKIITRCPNIISYSVEDNLRPTAMYFRSLGVDVGLLLFKCPQNFGLSIEANIKPVTEFFLERGYTSEEIGTMISRYGPLYTFSLTGNLMPKWDFFLTMGYPKSELVKFPQFFGYNLERRIKPRYARYARVKSYGVKLLLNQVLSLSTTKFEEVLKKKLKKLQNEENEETVK 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09481 483 PANTHER CGI-12 PROTEIN-RELATED 162 467 IPR003690 GO:0003690|GO:0006355
Vifa1g09481 483 Pfam mTERF 291 463 IPR003690 GO:0003690|GO:0006355
Vifa1g09481 483 Pfam mTERF 133 302 IPR003690 GO:0003690|GO:0006355
Vifa1g09481 483 Pfam mTERF 185 338 IPR003690 GO:0003690|GO:0006355
Vifa1g09481 483 Gene3D Transcription termination factor 3, mitochondrial 249 472 IPR038538 -
Vifa1g09481 483 SMART mt_12 169 201 IPR003690 GO:0003690|GO:0006355
Vifa1g09481 483 SMART mt_12 382 413 IPR003690 GO:0003690|GO:0006355
Vifa1g09481 483 SMART mt_12 242 273 IPR003690 GO:0003690|GO:0006355
Vifa1g09481 483 SMART mt_12 414 448 IPR003690 GO:0003690|GO:0006355
Vifa1g09481 483 SMART mt_12 206 237 IPR003690 GO:0003690|GO:0006355
Vifa1g09481 483 SMART mt_12 346 377 IPR003690 GO:0003690|GO:0006355
Vifa1g09481 483 SMART mt_12 278 308 IPR003690 GO:0003690|GO:0006355
Vifa1g09481 483 SMART mt_12 313 344 IPR003690 GO:0003690|GO:0006355
Vifa1g09481 483 Coils Coil 459 483 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vifa1g09481 mTERF 2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09481 K15032 - gmx:100781900 705.671