Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09340 ATGGATGCTCTAGATGTTGTCCACATTAGCAAAGGAGACCAGAAGAATGTATTTGCAATGCTTGTTGCAGTTTTATGGTTGAGAAACATATCATTTACTGTGATCAATAATGAAAATCATATTCAAGCTGTTGAAGATGAGGGGCTATTCAACACTGCCAAGTTAATTGGATGTGAAATTAAAGATCTGAAGTTGACTTTATCAACTCGCAAAATGAAAGTTGGTAATGGTATTATTGTCCAGAATTTGACGCTATCTCAGGCCAGTGATGCAAGAGATACTTTGGCGAAATCTATTTATGCATGTCTATTTGATTGGCTGATCGAACAAATAAACAAATCACTAGCCGTTGGCAAAAGAAGAACTGAAACCAATGGAACTATTATCCTTGACAATGTGGTTCTCATTCACAATCAGTTATTTGGATCTGATGACCTAGTCCAAGCTCCTAGAATCTTTAAAATTTCTGATGTAGACCGGTTGCATTCCTTCAGCGAGTCATATAAATTAGGTACCAATTTAGTCGAAGGTGCCCATTCTCCAAATTTGGCCAGTTTAGATGCTAAACTTGTTCCAGAGCACTTGCTTTATCTCTCGATTGACCGCGGAAGGAAGTTTCTTTCGTCATCTAAATCTGCAAATAGATACAATTTTTACAAGGATTCAAATGCTCACGAGATTGAACGAATGTTGAAAGTACTTGCACCCCTAAGACAACAGATTATGTCCAATCTAAATGAGTGGGAAGAACATAATGATCTTCAAAAAAATTGGCTGTCATTGACATGCTCCTGA 795 0.3723 MDALDVVHISKGDQKNVFAMLVAVLWLRNISFTVINNENHIQAVEDEGLFNTAKLIGCEIKDLKLTLSTRKMKVGNGIIVQNLTLSQASDARDTLAKSIYACLFDWLIEQINKSLAVGKRRTETNGTIILDNVVLIHNQLFGSDDLVQAPRIFKISDVDRLHSFSESYKLGTNLVEGAHSPNLASLDAKLVPEHLLYLSIDRGRKFLSSSKSANRYNFYKDSNAHEIERMLKVLAPLRQQIMSNLNEWEEHNDLQKNWLSLTCS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09340 264 Pfam Myosin head (motor domain) 2 122 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vifa1g09340 264 Gene3D Myosin VI head, motor domain, U50 subdomain 11 141 - -
Vifa1g09340 264 PANTHER MYOSIN 2 131 - -
Vifa1g09340 264 ProSiteProfiles Myosin motor domain profile. 1 264 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vifa1g09340 264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 120 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09340 Vifa-Chr1 1474935588 1474936601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09340 2 129 Myosins gene family AT1G50360 69.531 1.16e-53 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09340 - - gmx:100782618 211.846