Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09337 ATGGCAAAATCAATGAAAGCAAAAACAAATTGTTGCAATGGAACTCGTTCTAACAAGAAGAAGGAAAAGGAGTCAAAGAAGAAGTTGATTGATGGGAACAGAGATGTGGATCCTCAGCTATGGCATGCTATTGCTGGAGGAATGGTTCGAATTCCAGAAGTTAACTCTAAGATCTTCTACTTCCCTCAAGGTCATGCCGAGCATGCGTGTGTACCTGTCCATTTTCCTAATGACTTCAAAATTCCATCCCAAATTCCATGTAGAGTTGCAGCTATCCAATATAGGGCTGATCCTGACACAGATGAGGTGTATGCAAAACTCAGGCTTGTTCCTCTGCATATTAGCAAAGGAAGAAGGACTTTTGAATGGTCAACAATTTAG 381 0.4094 MAKSMKAKTNCCNGTRSNKKKEKESKKKLIDGNRDVDPQLWHAIAGGMVRIPEVNSKIFYFPQGHAEHACVPVHFPNDFKIPSQIPCRVAAIQYRADPDTDEVYAKLRLVPLHISKGRRTFEWSTI 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09337 126 MobiDBLite consensus disorder prediction 15 31 - -
Vifa1g09337 126 MobiDBLite consensus disorder prediction 1 31 - -
Vifa1g09337 126 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 34 111 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09337 Vifa-Chr1 1474819694 1474820074 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09337 34 112 B3 DNA Binding Superfamily AT4G30080 63.291 4.97e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09337 - - psat:127130059 169.474