Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09274 ATGAGCTTTTGGGTTAATCAATTGGGTTGGGATGCTCTTGCCCTCGCCAAAGTGCCGAGGGTTTTTGGGGCCAGTCTGGAGCGAAGGATCATACCAAGAGCCTCAGTTGTGCGTTATCTTTGGAAGAATGGTTTGCTAAAAAGGAATGCAAGTTTAACTTCTCCATTTGTAATCAACGAAAAGAATTTCCTTGAAGTGTATATAAATCGTTTTAAGGAGGAGTCTTCTTATCTATTAAAGCTTTACCAAGAAAAACTGAATCTTGCACACAACAAGGACAAAACCAGCATGGTTTGA 297 0.404 MSFWVNQLGWDALALAKVPRVFGASLERRIIPRASVVRYLWKNGLLKRNASLTSPFVINEKNFLEVYINRFKEESSYLLKLYQEKLNLAHNKDKTSMV 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09274 98 Gene3D Transcription termination factor 3, mitochondrial 1 81 IPR038538 -
Vifa1g09274 98 PANTHER CGI-12 PROTEIN-RELATED 1 73 IPR003690 GO:0003690|GO:0006355
Vifa1g09274 98 Pfam mTERF 1 64 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09274 Vifa-Chr1 1467931837 1467932133 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vifa1g09274 mTERF 2.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09274 K15032 - mtr:25488156 130.568