Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09268 ATGTTCAACTTCACCACATGGCGCCACAAAACCCTAATCTATCTCAAATCCTTAACTTCCCCACAAATTTCTCTCTATTTTTCAACCAACACTTCCGATTCAACCTCGTTTGCAGTCTCCTACCTCATCCACAATTTCGGTTTCTCCCCACAATTTGCTTCCAAACTATGCTCCACTTACCATGTTAAATTCAAAACCACCCAAAAACCTGATTCAGTTCTCAACTTCTTCAGAAACTACGGTTTCTCAGAACCCCAACTACGCGGTTTGATTGCAAAAGGACCCTATCTCCTTTCCTGCAACCCATCCAAAACGGTCTTGCCAAAGTTTCAATTTTTTCTCTCCAAAGGTGCCTCTTACTCTGACATTGTTAAGCTTGTCACTAAAAGCCCCTGTGTTTTGTGTACAAGCCTCAACAATCAAATTGTCCCAGCCTATGAATTGACGCGTAGATTCTTTCAATCCGACAAGGACACTATTGCTTGTGCAGTTCACACTCCAACTTTACTTTGTCACCACCAATTGTCACGTAATATTAGGATGTTAATTGAGAATGGAGTGCTACACTCAAGCATTGCAAGATTGCTTCAGAGGCTGCCTCGGGTGTTGGATACACGTGACATGCCGAAATTGGTGGAGGAATTAAAGGATTTGGGTTTTAATCCTTCAAAATCAGCCTTTGGTGTAGCATTGGCTGCAAAAACAACAGTAACCAAAACTCGGTGGAAAGAGAAAGTCGATGCCTTTAACAAATGGGGCTGGTCTGATGAAGATGTTCTCGATGCATTTAAAAGGCAGCCTAGATGTATGTCCATTAGTTTTTTCAACCAGTTTGGAGAAAAAGATCATTCCAAGGGCACCAGTAGTGCAATATCTACTGAAGAAAGCTGTACGAGGAAAAACTCAATTGTGCATAGTTGCATACAACATGGACAAAACTTACATTTCATGATCAGATTTTCAGGCTAG 969 0.4138 MFNFTTWRHKTLIYLKSLTSPQISLYFSTNTSDSTSFAVSYLIHNFGFSPQFASKLCSTYHVKFKTTQKPDSVLNFFRNYGFSEPQLRGLIAKGPYLLSCNPSKTVLPKFQFFLSKGASYSDIVKLVTKSPCVLCTSLNNQIVPAYELTRRFFQSDKDTIACAVHTPTLLCHHQLSRNIRMLIENGVLHSSIARLLQRLPRVLDTRDMPKLVEELKDLGFNPSKSAFGVALAAKTTVTKTRWKEKVDAFNKWGWSDEDVLDAFKRQPRCMSISFFNQFGEKDHSKGTSSAISTEESCTRKNSIVHSCIQHGQNLHFMIRFSG 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09268 322 Gene3D Transcription termination factor 3, mitochondrial 53 174 IPR038538 -
Vifa1g09268 322 PANTHER CGI-12 PROTEIN-RELATED 34 273 IPR003690 GO:0003690|GO:0006355
Vifa1g09268 322 SMART mt_12 88 119 IPR003690 GO:0003690|GO:0006355
Vifa1g09268 322 SMART mt_12 193 221 IPR003690 GO:0003690|GO:0006355
Vifa1g09268 322 SMART mt_12 124 155 IPR003690 GO:0003690|GO:0006355
Vifa1g09268 322 Pfam mTERF 74 273 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09268 Vifa-Chr1 1467014528 1467016910 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vifa1g09268 mTERF 2.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09268 K15032 - mtr:25488156 341.658