Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09240 ATGGCATTTCACTTGCCTTTGATAAAGCAAGCTAAGAAGCATATCCTCTGCCGCACATTTTCAAAAGGCAAGACAGTGTTGCCAGCTAATAGTAATATACCAAAAGGGTATTTAGCAGTATATGTTGGAGAAGAGAAAAAGAAGAGATTTGTGGTTCCAATATCATATTTGCATCAACCTGCTTTTCAACAATTTCTTTGTAAAGCTGAAGAAGAATTCGGATTTAATCATCCAATGGGTGGTCTCACAATTCCTTGTAGAGAAGACATCTTTGTCAATGTCACTTCTCAATTGGAAAGTTAA 303 0.363 MAFHLPLIKQAKKHILCRTFSKGKTVLPANSNIPKGYLAVYVGEEKKKRFVVPISYLHQPAFQQFLCKAEEEFGFNHPMGGLTIPCREDIFVNVTSQLES 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09240 100 Pfam Auxin responsive protein 27 96 IPR003676 GO:0009733
Vifa1g09240 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 25 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09240 Vifa-Chr1 1462211061 1462211363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09240 32 91 Calmodulin-binding Proteins AT3G43120 53.333 7.90e-16 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09240 K14488 - aew:130774568 131.724