Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09214 ATGCTTTTGTTTCTTGCCATTTTTATAAATATACTATTGGATAGAGATTGTCTCACCTCTCAAAGGAGTCTAAGAGCTGCTGTGAAGGGAAACATTGAAAGGAGTCTAAGAGCTGCTGTGAAGGGAACCTTGACAGCCTACCATGTTATTGCAAAGGTGAGCAAGGTTGGTGCTTATTCAAGAATAAAGCAAGAACTAGAGTCAAAGAAACAAGAATTCACCTATGAAGAAGTATTAAGCATTACCAGAAACTTTGAAAAGGGAGGTCAAAAGCAAAGAGTTGCAATTGGAAGAGCAATTTTGAAAGATCCAAAAATATTACTTCTTGATGAAGCTACAAGTGCCCTTGATGCCGAGTGTGCATGTATTGATACTAACTTGTGCATTTGTATGTTCTTTTTAAACCTTGGTGATTTCCTTGTGCAGAAACTAGGGGAAGGTGTGAAAGGGGTGTATATCTCGATAGACGTGGATTGTCTTGATCCTGCATTTGCTCCGGGAGTGTCTCATATTGAACCGGGAGGTCTTTCTTTCCGCGATGTTCTTAACATCCTACACAATCTTCAAGGTGATGTTGTTGCTGGAGACGTCGTTGAACTCAACCCACAACGCGATACTGTTGATGGAATGACTGCTATGGTAGCTGCTAAGTTGGTCAGAGAAATGGCTGCAAAGATTGCAAAATGA 687 0.4061 MLLFLAIFINILLDRDCLTSQRSLRAAVKGNIERSLRAAVKGTLTAYHVIAKVSKVGAYSRIKQELESKKQEFTYEEVLSITRNFEKGGQKQRVAIGRAILKDPKILLLDEATSALDAECACIDTNLCICMFFLNLGDFLVQKLGEGVKGVYISIDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQGDVVAGDVVELNPQRDTVDGMTAMVAAKLVREMAAKIAK 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09214 228 Gene3D - 88 120 IPR027417 -
Vifa1g09214 228 ProSiteProfiles Arginase family profile. 138 228 IPR006035 GO:0046872
Vifa1g09214 228 Pfam ABC transporter 88 114 IPR003439 GO:0005524
Vifa1g09214 228 PANTHER ARGINASE/AGMATINASE 141 228 IPR006035 GO:0046872
Vifa1g09214 228 SUPERFAMILY Arginase/deacetylase 138 224 IPR023696 -
Vifa1g09214 228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 120 IPR027417 -
Vifa1g09214 228 Gene3D Ureohydrolase domain 131 228 - -
Vifa1g09214 228 ProSitePatterns Arginase family signature. 154 175 IPR020855 GO:0016813|GO:0046872
Vifa1g09214 228 Pfam Arginase family 142 222 IPR006035 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09214 Vifa-Chr1 1457737529 1457739202 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09214 88 120 Calmodulin-binding Proteins AT2G36910 78.788 4.31e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09214 K01476 - gmx:100789799 169.474