Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g09207 | ATGGCAACAGCAACAATGAAAACATTACCAACACTTTCACTTCTTTTGTGTTTTTTCTCTTCTGTTCTTTCTAGTGAAAATGACATCATCACTAAAAAAGTACTTTTGGAGGTTAAGTCTTCTTTTCTGACTGACCCTGAAAATGTTTTAGGAACTTGGTCGGAAGAAAACACTGATTATTGTACTTGGAGAGGTGTTTCATGTGACTTGTTGCATGTTGTGGTTGGACTCAACTTGTCTGACTCGAAACTCACTGGGTCAGTTTCATCTTCACTCGGCCTTTTACAAAACCTACTCCACCTTGATCTTTCAGCTAATCATCTTGTGGGTCCCATTCCACCTTCTCTCTCAAATCTCACTAAATTAGAATCTTTGCTTCTTTATTCAAACCAACTCGCTGGTCAGATTCCAAACGAGTTGGGTTTGTTAGTGAGTCTCCGAGTTTTGCGAATCGGGGATAATAAACTCACTGGCGAAATTCCATCTTCTTTGGGGAATCTTGTAAACCTTGTTGTCCTTGGTTTAGCTTCATGCAAACTCACCGGTTCGATTCCGCATCAACTTGGTCGACTCACTGAGTTGAACAATTTGATCTTGCAAGACAACGAGTTAACAGGCCCGATTCCATCCGAGTTAGGAAACTGCTCAAGCCTCATCTGCTTCACTGCTTCTGACAACAAACTCAACGGCACAATCCCGAGTCAACTGGGTCAGCTCAGAAGCCTCCAGATTCTCAACCTTGCAAACAATTCCTTAACTGGGGAGATTCCGAGTCAACTCGGTCAATTGAACGAGCTTAATTATCTAAGTTTAACGGAAAACAAGCTCGAGGGTTACATTCCACCGTCTTTATCTCAAATGGGTAGCCTTCAAAATCTTGACTTGTCAAAGAACAAACTCAGTGGAGGAATTCCAGAAGAATTTGGTAACATGCATCGGTTGAAATTCTTAGTTCTTTTCGAAAACCCTTTAAGTGGAAAAATTCCAAAAACTTTATGTTCCAATGCAACAAATTTGGAGCATTTATTGATTTCAATGAGTGAACTTTATGGTGAGATTCCATCTGAATTGAGTCAATGCAAGTCATTGAAGCAAATTGATTTATCCAACAATTTTCTCAATGGAACAATTCCTCTTGAGATTTATGGTTTGGTGAACATAACAGATCTTTTGCTTCACAACAATAGTTTAATTGGTTCGGTTTCATCTTTCATAGGGAACTTAACAAACTTGAAAACACTTGCATTGTATCATAACAAGTTGCATGGTGCTTTGCCTAAGGAGATTGGGATGCTTGGAAAGATGGAGATTTTGTATCTTTATGATAATCAGTTTTCGGGGAATATACCCAATGAGATTGGTAATTGCTCAAATTTGAAAATGGTTGATTTCTTTGGTAACCGTTTTGGTGGAAGAATTCCAATTACGATTGGAAGATTGAAAGAATTGAGTTTTCTTCACATTAGACAGAACGAGCTTGTTGGTGAGATTCCGGCTACGCTTGGGAACTGTCATAAACTGAATGTGCTTGATTTGGCAGATAATAACCTCTCTGGTGGAATTCCTGCGACATTCGGGTACTTGAAAGATTTGCAGCAGTTCATGCTTTACAACAACTCTCTTGAAGGTGGTATTCCTCGTCAAATGGCAAATGTAGCAAACTTGACAAGAGTTAATCTCTCGAAGAACAGATTGAATGGAAGTTTAGCTCCATTGTGCAGCTCTAGAGGTTTTCTTTCTTTTGATGTTACAGGTAATGAATTTGATGGTGAAATTCCTTCAAACTTGGGTAACTCTATGTCACTTAAGAGGCTAAGATTAGGAGGTAACAGGTTTTCTGGTGAAATTCCGAGGACATTGGGAAAAATCGTTGATCTGTCTTTGTTAGATCTCTCGGAGAATTCACTCACAGGGCCGATACCAGGTGAACTATCTCTGTGTAATAAACTGTCCTCTGTTGATTTAAGCAATAACCTTCTTGTTGGACATGTACCGTCGTGGCTTGGTAATTTGCCTAGTTTAGGAAAGCTTAATCTTGCATTTAATCAATTTTCCGGGCCTTTTCCACTAGGCCTATTCAAATTACCGACGTTGTTGGTTCTTTCTTTAAATAACAATTCTCTTAATGGAAGTCTCCCTGATGGTATCGGCGATCTCAAATCGCTTAATGTCCTTAGACTTGATCGTAATAATTTTTCTGGACCAATCCCTCGTGCCATAGGGAAGTTGGGAAATCTTTATGAGCTCAATCTATCCAGAAATGTCTTTTGTAGTGACATACCAAATGAGATTGGAAATCTTCAAAATCTCCAAATTGCTTTGGATTTGAGTAACAATAATCTCTCGGGTCAGCTTCCTTCTTCTCTCGGTACGTTATCAAAATTAGAAGCACTTGATTTGTCTCACAACAAACTCACAGGCGAAGTTCCTCCGAACATTGGTGAAATGATTAGCTTGGATAAGCTTGATATCTCTTATAATGATTTTCAAGGTGCATTGGGTAAGCGATTCTCACGCTGGCCGTATGAGGCTTTTGCAGGGAACTTTCATCTCTGTGGAGCCTCTTTCCGTAGCTGCAACCGCGGTGGTGCTTCCCCAAATAAGCTAGCAGGGTTAAGTGAGACAGCTGTGATCATAATCTCCGCGATTTCAACACTAGCTGCAATTGTGATATTTATTCTTGCAGTGAAAATCTTCTTGAGAAATAGGCAATATTTTTGGAACAAAGATAGCGAATTAGCCGGTGTTTTCTCTTCTTCTACGTCACAAGCAAAGAAACGGCTGTTGTTCCCTGTAAGTACAGCTGGAAAACGAGATTTCAGGTGGGAAGACATCATGGCTGCTACAAACAATTTGAGCGAAGAATTCATAATCGGTTCAGGAGCTTCTGGAACTGTCTACAGAGTTGAATTACCTACTGGCGAAACTGTGGCTGTCAAGAAGATTTCATTGAAAGACGAATATCTGTTGCATAAAAGCTTCATAAGAGAAATAAAGACTTTGGGCAGGATTAAGCATCGACACTTGGTGAAACTGGTTGGTTGTTGTAGCAATAGAAACAAAGGAAATGGTTGTAATCTGTTGATATACGAGTACATGGAAAACGGAAGCGTTTGGGATTGGTTACATGGAAATGCACTAAAGTTAAAGAGAAACCTTGATTGGGAAACAAGGTTCAAAATCGCTTTAGGGTTAGCTCAAGGGATGGAGTATCTTCATCATGATTGCGTGCCAATGCTCATTCACAGGGACATCAAATCCAGCAATATATTGTTAGATTCTAACATGGATGCACACTTGGGAGATTTCGGATTAGCAAAAGCACTCATAGAGAATCATGATACTAATACCGAATCTACTTGTTTTGCAGGTTCTTATGGTTACATAGCTCCAGAGTTTGGATACTCGTTAAAGGCGACAGAGAAAAGCGATGTTTACAGCATGGGAATTGTGCTTATGGAACTTGTGAGCGGCAAAAAGCCAACAGATGAAGCTTTTAGAACAGGTATAGACATGGTGAGATGGGTGGAGAGGCACGTCGACTCGAAAGGGACCGAGCGCGATGAACTAATAGATCCCGAACTAAAACCGCTTTTACCTATTGAAGAGTTTGCAGCATTTCAAGTGCTTGAGATAGCTTTACAATGCACCAAAACTGCACCAATGGATAGACCAACATCGAGGCACGTTTGTGATCTTCTTCAACATGTGTCCAAGAACAAAAAAGTGGAGTTTAAGAAGATGGATTTGGATACTTACAACTGA | 3765 | 0.3997 | MATATMKTLPTLSLLLCFFSSVLSSENDIITKKVLLEVKSSFLTDPENVLGTWSEENTDYCTWRGVSCDLLHVVVGLNLSDSKLTGSVSSSLGLLQNLLHLDLSANHLVGPIPPSLSNLTKLESLLLYSNQLAGQIPNELGLLVSLRVLRIGDNKLTGEIPSSLGNLVNLVVLGLASCKLTGSIPHQLGRLTELNNLILQDNELTGPIPSELGNCSSLICFTASDNKLNGTIPSQLGQLRSLQILNLANNSLTGEIPSQLGQLNELNYLSLTENKLEGYIPPSLSQMGSLQNLDLSKNKLSGGIPEEFGNMHRLKFLVLFENPLSGKIPKTLCSNATNLEHLLISMSELYGEIPSELSQCKSLKQIDLSNNFLNGTIPLEIYGLVNITDLLLHNNSLIGSVSSFIGNLTNLKTLALYHNKLHGALPKEIGMLGKMEILYLYDNQFSGNIPNEIGNCSNLKMVDFFGNRFGGRIPITIGRLKELSFLHIRQNELVGEIPATLGNCHKLNVLDLADNNLSGGIPATFGYLKDLQQFMLYNNSLEGGIPRQMANVANLTRVNLSKNRLNGSLAPLCSSRGFLSFDVTGNEFDGEIPSNLGNSMSLKRLRLGGNRFSGEIPRTLGKIVDLSLLDLSENSLTGPIPGELSLCNKLSSVDLSNNLLVGHVPSWLGNLPSLGKLNLAFNQFSGPFPLGLFKLPTLLVLSLNNNSLNGSLPDGIGDLKSLNVLRLDRNNFSGPIPRAIGKLGNLYELNLSRNVFCSDIPNEIGNLQNLQIALDLSNNNLSGQLPSSLGTLSKLEALDLSHNKLTGEVPPNIGEMISLDKLDISYNDFQGALGKRFSRWPYEAFAGNFHLCGASFRSCNRGGASPNKLAGLSETAVIIISAISTLAAIVIFILAVKIFLRNRQYFWNKDSELAGVFSSSTSQAKKRLLFPVSTAGKRDFRWEDIMAATNNLSEEFIIGSGASGTVYRVELPTGETVAVKKISLKDEYLLHKSFIREIKTLGRIKHRHLVKLVGCCSNRNKGNGCNLLIYEYMENGSVWDWLHGNALKLKRNLDWETRFKIALGLAQGMEYLHHDCVPMLIHRDIKSSNILLDSNMDAHLGDFGLAKALIENHDTNTESTCFAGSYGYIAPEFGYSLKATEKSDVYSMGIVLMELVSGKKPTDEAFRTGIDMVRWVERHVDSKGTERDELIDPELKPLLPIEEFAAFQVLEIALQCTKTAPMDRPTSRHVCDLLQHVSKNKKVEFKKMDLDTYN | 1254 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g09207 | 1254 | ProSitePatterns | Protein kinases ATP-binding region signature. | 958 | 981 | IPR017441 | GO:0005524 | |
Vifa1g09207 | 1254 | Gene3D | Ribonuclease Inhibitor | 573 | 862 | IPR032675 | - | |
Vifa1g09207 | 1254 | SUPERFAMILY | Protein kinase-like (PK-like) | 930 | 1234 | IPR011009 | - | |
Vifa1g09207 | 1254 | ProSiteProfiles | Protein kinase domain profile. | 952 | 1239 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g09207 | 1254 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1080 | 1092 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa1g09207 | 1254 | Gene3D | Ribonuclease Inhibitor | 474 | 572 | IPR032675 | - | |
Vifa1g09207 | 1254 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 913 | 1032 | - | - | |
Vifa1g09207 | 1254 | SMART | serkin_6 | 952 | 1239 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g09207 | 1254 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 499 | 573 | - | - | |
Vifa1g09207 | 1254 | Gene3D | Phosphorylase Kinase; domain 1 | 914 | 1032 | - | - | |
Vifa1g09207 | 1254 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 187 | 280 | - | - | |
Vifa1g09207 | 1254 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 281 | 382 | - | - | |
Vifa1g09207 | 1254 | SUPERFAMILY | L domain-like | 280 | 617 | - | - | |
Vifa1g09207 | 1254 | SUPERFAMILY | L domain-like | 35 | 329 | - | - | |
Vifa1g09207 | 1254 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 29 | 186 | - | - | |
Vifa1g09207 | 1254 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 403 | 498 | - | - | |
Vifa1g09207 | 1254 | Pfam | Leucine rich repeat N-terminal domain | 33 | 69 | IPR013210 | - | |
Vifa1g09207 | 1254 | FunFam | Leucine-rich repeat receptor-like protein kinase | 1033 | 1251 | - | - | |
Vifa1g09207 | 1254 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1033 | 1253 | - | - | |
Vifa1g09207 | 1254 | Gene3D | Ribonuclease Inhibitor | 179 | 282 | IPR032675 | - | |
Vifa1g09207 | 1254 | Gene3D | Ribonuclease Inhibitor | 378 | 473 | IPR032675 | - | |
Vifa1g09207 | 1254 | Pfam | Leucine rich repeat | 266 | 324 | IPR001611 | GO:0005515 | |
Vifa1g09207 | 1254 | Pfam | Leucine rich repeat | 506 | 565 | IPR001611 | GO:0005515 | |
Vifa1g09207 | 1254 | Gene3D | Ribonuclease Inhibitor | 283 | 377 | IPR032675 | - | |
Vifa1g09207 | 1254 | Gene3D | Ribonuclease Inhibitor | 31 | 178 | IPR032675 | - | |
Vifa1g09207 | 1254 | PANTHER | UNNAMED PRODUCT | 644 | 1163 | - | - | |
Vifa1g09207 | 1254 | SMART | LRR_typ_2 | 191 | 215 | IPR003591 | - | |
Vifa1g09207 | 1254 | SMART | LRR_typ_2 | 408 | 431 | IPR003591 | - | |
Vifa1g09207 | 1254 | SMART | LRR_typ_2 | 432 | 456 | IPR003591 | - | |
Vifa1g09207 | 1254 | SMART | LRR_typ_2 | 287 | 310 | IPR003591 | - | |
Vifa1g09207 | 1254 | SMART | LRR_typ_2 | 143 | 167 | IPR003591 | - | |
Vifa1g09207 | 1254 | SMART | LRR_typ_2 | 743 | 767 | IPR003591 | - | |
Vifa1g09207 | 1254 | SMART | LRR_typ_2 | 695 | 719 | IPR003591 | - | |
Vifa1g09207 | 1254 | SMART | LRR_typ_2 | 95 | 119 | IPR003591 | - | |
Vifa1g09207 | 1254 | SMART | LRR_typ_2 | 239 | 263 | IPR003591 | - | |
Vifa1g09207 | 1254 | SMART | LRR_typ_2 | 480 | 504 | IPR003591 | - | |
Vifa1g09207 | 1254 | SMART | LRR_typ_2 | 792 | 816 | IPR003591 | - | |
Vifa1g09207 | 1254 | SUPERFAMILY | L domain-like | 576 | 834 | - | - | |
Vifa1g09207 | 1254 | PRINTS | Leucine-rich repeat signature | 290 | 303 | - | - | |
Vifa1g09207 | 1254 | PRINTS | Leucine-rich repeat signature | 792 | 805 | - | - | |
Vifa1g09207 | 1254 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 574 | 862 | - | - | |
Vifa1g09207 | 1254 | Pfam | Protein kinase domain | 957 | 1231 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g09207 | Vifa-Chr1 | 1456246582 | 1456250440 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g09207 | 34 | 693 | Receptor kinase-like Gene Family | AT1G17750 | 33.147 | 3.87e-97 | 334 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Vifa1g09207 | Pkinase | 7.9e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g09207 | - | - | gmx:100797153 | 1707.96 |