Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09192 ATGTCGCCCTTATTCTATTACTCATTACTCTCTCTAACCTTCATAATAACCATCAAAATCTTACGCCAAACCCAATCAAGGAAGCTAAAAAACCTTCCACCAGGTCCACCAACAATCCCCATAATTGGCAACCTCCACCACCTAAAACACCCTCTCCACCGTACCTTCACAACCTTGTCTCAAAAATACGGCGACATCTTTTCCCTTTGGTTCGGTTCGCGCCTAGTTGTCGTTGTCTCTTCGCCTTCTTTAGTCGAGGAATGTTTAATCAAAAACGACATAGTTTTAGCAAACCGACCACGGTTCCTAACCGGAAAATACATCTTCTACAACTACACCACGTTAGGCTCAGCTGCTTACGGACACCATTGGCGTAACCTACGCCGTATAATAACCATTGATGTTCTCTCTAACAGCCGTCTTAACTCCTTTTTGGAAGTTCGCATAGACGAAGCAAATAGACTTATTCAAAAGCTAGCTGTTTCTAGAGATTTTATCGAAGTGGAACTCCGGTCGAGACTAACGGAGATGACGTTTAATGCTATGATGAGAATGATATCTGGAAAACGGTATTATGGAGACGACGGAGACGTGACGGACGTTGAAGAAGCCAAACAGTTTAGGGAAATAATCAGTGAGATAATGTCTTTGTTAGGTGCTAATAACAAAGCTGATTTTCTGCCTTTGTTAAAGTTGTTTGGTATTAACAACTTGGAGAAGAGGTGCAAGAAAATCGCAAAAAGTTGTGATTCATTTTTGGAGGGTCTCATTGAAGAACATCGGAGTGGAAATCATAGTGATGGAGATACCATGATTGATCATCTTTTGAAGCTTGGTGAGTTGCAGCCTGAATATTATTCTGCTCACATCATCAAAGGTCTTATTCAGGCTATGCTTCTTGCAGGAACAGACACTTCAGCACTGACTATAGAATGGGTGATGGCTGAATTACTAAACCATCCAGAAGTGTTGAGAAAAGCAAAGGAAGAAATAGAGACTCAAATTGGAAAAAACAAGTTAATAGAGGAACAAGATTTGCCAAAACTTCCATATCTACAAAACATAATCTCTGAGACACTTAGATTACACCCAATAGCACCATTACTTATACCACATTATTCTTCAGGGGATTGTACCATTGGAGGATTCAATGTTCCAAAAGATACTATAATTTTGACTAATGTCTGGGCCATTCATAGAGACCCAACACTTTGGAGTGATGCTTTGAGTTTTAAGCCTGAGAGGTTTGAAAAAGAAGGGGAGGTTAACAAGTTGATTGCATTTGGGTTGGGGAGAAGGGCTTGTCCTGGATTGAGTTTGGCCCAACGTACGGTGGGCTTAACTGTGGGCTTGTTGGTTCAATGCTTTGAATGGAAAAGGGAGAGTGAGGAGAAACTTGATATGATGGAGGGTAAAGGAGTTACCATGCCTAAAAGTATTCCATTTAAGGCTCTGTGTAAAGCACTACCTATTGCTAACGATCTTATGAAGTGA 1494 0.4083 MSPLFYYSLLSLTFIITIKILRQTQSRKLKNLPPGPPTIPIIGNLHHLKHPLHRTFTTLSQKYGDIFSLWFGSRLVVVVSSPSLVEECLIKNDIVLANRPRFLTGKYIFYNYTTLGSAAYGHHWRNLRRIITIDVLSNSRLNSFLEVRIDEANRLIQKLAVSRDFIEVELRSRLTEMTFNAMMRMISGKRYYGDDGDVTDVEEAKQFREIISEIMSLLGANNKADFLPLLKLFGINNLEKRCKKIAKSCDSFLEGLIEEHRSGNHSDGDTMIDHLLKLGELQPEYYSAHIIKGLIQAMLLAGTDTSALTIEWVMAELLNHPEVLRKAKEEIETQIGKNKLIEEQDLPKLPYLQNIISETLRLHPIAPLLIPHYSSGDCTIGGFNVPKDTIILTNVWAIHRDPTLWSDALSFKPERFEKEGEVNKLIAFGLGRRACPGLSLAQRTVGLTVGLLVQCFEWKRESEEKLDMMEGKGVTMPKSIPFKALCKALPIANDLMK 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09192 497 Pfam Cytochrome P450 33 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09192 497 Coils Coil 324 344 - -
Vifa1g09192 497 Gene3D Cytochrome P450 17 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09192 497 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09192 497 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09192 497 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09192 497 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09192 497 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09192 497 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09192 497 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09192 497 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09192 497 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09192 497 PANTHER CYTOCHROME P450 82C3-RELATED 12 487 - -
Vifa1g09192 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Vifa1g09192 497 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09192 497 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09192 497 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09192 497 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09192 497 SUPERFAMILY Cytochrome P450 33 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09192 497 CDD CYP81 64 481 - -
Vifa1g09192 497 FunFam Cytochrome P450 family protein 23 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09192 Vifa-Chr1 1453321254 1453322895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09192 9 490 Cytochrome P450 AT4G37370 52.977 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09192 K13260 - ccaj:109806032 698.738