Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09156 ATGTTGCATGGAGTTCAAATGGACAGTAGTCATGTGGAAGTAAATGATCAAGAGCCCGAAACACCACAATTTTGCACTCAAGCTCAAGATGGGTTGGAAACAATCAACCTTGGTGAAGAAGTCAAAACTACATCGGTTATGAATATGTCGAAAATAAGATTTCAACCAAAGGAGGATGAACTTCTCATTCAATCATGGCTCAACATTTCAAGGGATCCAATTGTTGGGGTTGATCAAAAGAGAATAGTTTCTGGAAGAGGATTGGTGAAGCTTATAACAACCACCGCCACAAGAATTTTCCCGAGAGGAATCCCTGTCGCTATAAAGAAAAGTGGTAGCTCTGAGAGTGACATCGTTTCGGCGGCATGTGATATTTATTACCAAGACGGACATGAAAAGTTCACATTTCAGAGTGCATGGAAATTATTGAGAGATGAACCCAAATGGCTTGGAGGTTCATCGGAACCTTCTGCAAAAAGAACAAAGAGTTCGGCTTCCGGAGCATATTCAACATCTTCTAACCCAACAACACCAACAAGCGAATACAATCCACCATCACCGACTTTGTTACATCGTCCAATCGGTAATAAGGCGGCCAAAAGGAAGCAAAAAGAAAAGTTTGTGGAAAAACCTACTCCTAAATTTGATGCTATGAAAGATGACTTAAACAAAAAAGTTGAATTAATGTCGGGTTTTGCACGTGATTATGCACGTATTGAGAGTGAAAAAATGGAGATAGAGAGGAAAAGGGTTGATGCTAAGTTGCATGCGGCAAAGATTAATGATTTGCAAATACTCTCGAAGGATACATCAAATATGACACCAAGACAACTACAAGATCACGAATTTTTGTGCGGTGTAATTAGAGATAGATATGGAGTTAAATGA 888 0.3941 MLHGVQMDSSHVEVNDQEPETPQFCTQAQDGLETINLGEEVKTTSVMNMSKIRFQPKEDELLIQSWLNISRDPIVGVDQKRIVSGRGLVKLITTTATRIFPRGIPVAIKKSGSSESDIVSAACDIYYQDGHEKFTFQSAWKLLRDEPKWLGGSSEPSAKRTKSSASGAYSTSSNPTTPTSEYNPPSPTLLHRPIGNKAAKRKQKEKFVEKPTPKFDAMKDDLNKKVELMSGFARDYARIESEKMEIERKRVDAKLHAAKINDLQILSKDTSNMTPRQLQDHEFLCGVIRDRYGVK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09156 295 MobiDBLite consensus disorder prediction 1 21 - -
Vifa1g09156 295 MobiDBLite consensus disorder prediction 156 186 - -
Vifa1g09156 295 MobiDBLite consensus disorder prediction 151 208 - -
Vifa1g09156 295 PANTHER - 42 81 - -
Vifa1g09156 295 Pfam No apical meristem-associated C-terminal domain 133 277 IPR029466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09156 Vifa-Chr1 1449160335 1449161296 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09156 41 205 Glutathione S-transferase Gene Family AT5G41240 27.228 4.03e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09156 - - mtr:11446189 335.495