Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09151 ATGAATCCTTCATTTCTTTTGAAATTCTTCTTACTACATATTGTTCTTTTCTTTGGCTTTCTTGGTGCAACTGAACCTCAACTAACACTTGATTACTATGCATCAACTTGTCCTACTGTGTTTGATATTGTTAGAAAGGAAATGGAATGTTCAGTTCTTTCTAATCCCCGTAACGCCGCTTCCATTCTCCGGCTTCACTTCCATGACTGCTTTATTCAGGGATGCGATGGATCGATCTTGCTCGATGATACAATCACGCTCAAAAGTGAAAAGACAGCAGCTGCCAACATCCACTCTTTAAAAGGCTTTGGAATTATAGATCAAATCAAGAACTTTGTTGAATCTGAGTGCCCGGGAGTTGTTTCTTGTGCTGATATTCTCACAATTGCAGCTAGAGATGCTGTCATTCTGGTTGGTGGACCATACTGGGATGTTCCTGTTGGAAGAAAGGATTCTGTGACTGCAAGTTTTGAACTTACTGACACCAATCTTCCAACTTCTGATGAGAGCCTTGTCTCTATCATTCCCAAGTTTCTTTATCAAGGCCTATCAGTTACAGATATGGTTGCTCTTGTAGGATCACACACCATTGGTATGGCAAGGTGTCAGAATTTTCGATCAAGAATATATGGAGACTACGAATCAACTTCAGCGAAAAATCCAATCTCGGATAATCAATTCAACAACCTTAAATCTATTTGTCCACCAAATGGAGGAGGAAAGAATAACATAACAGCAATGGACTACGTTACGCCTAATCTCTTCGACAACTCTTTTTACCAGTTACTGTTAAAAGGCGAGGGAGTTCTTAACTCTGATCAAGAAATGTACTCGAGTGTATTTGGAATCGCAACAAGAGAGCTTGTGAAGAAGTATGCAGCGGACTCTTTGGCTTTCTTCCAGCAATTCTCTGATTCAATGGTCAAAATGGGAAATATCACTAATTCAGAGAGCTTTGTAACTGGAGAAGTTAGGAAAAACTGCAGATTTGTGAACACATAA 1002 0.3962 MNPSFLLKFFLLHIVLFFGFLGATEPQLTLDYYASTCPTVFDIVRKEMECSVLSNPRNAASILRLHFHDCFIQGCDGSILLDDTITLKSEKTAAANIHSLKGFGIIDQIKNFVESECPGVVSCADILTIAARDAVILVGGPYWDVPVGRKDSVTASFELTDTNLPTSDESLVSIIPKFLYQGLSVTDMVALVGSHTIGMARCQNFRSRIYGDYESTSAKNPISDNQFNNLKSICPPNGGGKNNITAMDYVTPNLFDNSFYQLLLKGEGVLNSDQEMYSSVFGIATRELVKKYAADSLAFFQQFSDSMVKMGNITNSESFVTGEVRKNCRFVNT 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09151 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Vifa1g09151 333 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09151 333 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09151 333 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09151 333 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09151 333 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09151 333 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09151 333 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09151 333 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09151 333 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09151 333 SUPERFAMILY Heme-dependent peroxidases 27 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa1g09151 333 FunFam Peroxidase 165 310 - -
Vifa1g09151 333 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Vifa1g09151 333 ProSiteProfiles Plant heme peroxidase family profile. 27 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g09151 333 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g09151 333 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g09151 333 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g09151 333 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g09151 333 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g09151 333 CDD secretory_peroxidase 27 331 IPR033905 GO:0004601|GO:0042744
Vifa1g09151 333 Gene3D Peroxidase, domain 2 165 310 - -
Vifa1g09151 333 PANTHER PEROXIDASE 72-RELATED 25 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09151 333 FunFam Peroxidase 31 173 - -
Vifa1g09151 333 Pfam Peroxidase 44 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g09151 333 Gene3D - 32 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09151 Vifa-Chr1 1448499035 1448500456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09151 5 333 Peroxidase AT1G68850 67.365 3.63e-170 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09151 K00430 - gmx:100780750 563.918