Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09121 ATGCTCTCTCGTGGCAACATCTCTCCTCTCTCGCCCTCTCTACGATTCAACCTCAAAACACGAACTCCCCATCGAAACCTCACCGTTTCATCCCGAACAAGCTTAGACTACCCGCTCTCCATATCCGACGAGGCACTCGAGTCACGAGGCTTCATTCTCCGGCGAACCGCGGAGGGGCTAAACCTGGAAGGGCTGAACAAAGTATTCGTAGCGGTGGGGTTTCCGAGACGTGACCCGGAGAAGATACGAGTGGCGCTTGAGCATACAGACTCGATGGTGTGGGTGGAGCAGAGAAAGTCGCAGAAAGCGGTTGCGTTTGCGAGAGCTACTGGGGATGGTGTTTTCAATGCGATTATTTGGGATGTTGTTGTTGATCCTTCGTTTCAAGGGATTGGGCTTGGGAAAGCTGTTGTCGAGAGGCTCATTGAGGATCTTGTGGGGAGAGGAATTTCGAATATTGCTTTGTATTCTGAGCCTCGTGTTCTGGGCTTTTATCGCCCTTTGGGGTTTGTTTCTGATCCCGATGGGATTAGAGGAATGGTTTACTCTAGAAAACAAAAGACTAAATAA 570 0.5018 MLSRGNISPLSPSLRFNLKTRTPHRNLTVSSRTSLDYPLSISDEALESRGFILRRTAEGLNLEGLNKVFVAVGFPRRDPEKIRVALEHTDSMVWVEQRKSQKAVAFARATGDGVFNAIIWDVVVDPSFQGIGLGKAVVERLIEDLVGRGISNIALYSEPRVLGFYRPLGFVSDPDGIRGMVYSRKQKTK 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09121 189 FunFam Putative acetyltransferase NSI 56 183 - -
Vifa1g09121 189 Gene3D - 54 184 - -
Vifa1g09121 189 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 52 188 IPR000182 GO:0016747
Vifa1g09121 189 PANTHER ACYL-COA N-ACYLTRANSFERASE 27 187 IPR045039 GO:0008080
Vifa1g09121 189 Pfam Acetyltransferase (GNAT) family 79 170 IPR000182 GO:0016747
Vifa1g09121 189 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 61 173 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09121 Vifa-Chr1 1444401844 1444402413 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vifa1g09121 Acetyltransf_1 1.7e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09121 K22450 - gmx:100778613 273.863