Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g09117 | ATGAACCAGTATCACATCTACGAAGCCATTGGTCGTGGCAGATACTCCACGGTCTATAAAGGCAGAAAGAAGAAGACCATCGAGTATTTTGCGATTAAAAGCGTTGATAAATCTCAGAAAAACAAGGTTCTTCAAGAAGTTAGGATTCTTCACACTTTGGATCACCAAAATGTGCTCAAGTTTTATTCATGTGTTAACTCTCAGGAAGACCTTAACATCCAAAATAATAAACGGTTTTTGGCTAAGTCCTGGGATAACCTAGAAGAACTTCCTGATGATCATGGGGATGATATAGAGGAGGAAATTGAGGACCCTAAAGCTGATTTTATAAGTGCTGATTATGAAGATGAATTTCAGGATATTCAGCTTCCTGAAGAATCTGTTAATGAGCTTGCTTGTGACCTCGTTAGAGCTCTGCAGTATTTACATTCAAATGGAATAATTTATTGTGATCTGAAACCATCAAATATTCTACTAGATGAAAATGGACGTACAAAGCTCTGTGATTTCGGATTGGCCAGAAAGTTAAAAGAGATATTGAAAGTTCCTTCTTCTTCGTTGCCTCAAGCAAAACGTGGAACACCCTCTTACATGGCTCCGGAGCTTTTTGAAGATGGCGGAGTTCATTCTTATGCTTCTGATTTCTGGGCTCTAGGTTGTGTACTATATGAATGTTATTCTGGGAGGCCTCCTTTTGTGGGAAGAGAATTCACTCACCTTGTAAAATCCATCATTTCAGACCCGACTCCACCTCTCCCTGGAAATCCAAGTCGACCTTTTGTCAATTTAATTAATTCTCTGTTTGTCAAAGATCTAGCCGAAAGAATACAGTGGCCCGAGCTTTGTGGTCATGCCTTTTGGAAAACTAAATTCTCTCTAGTGTCTCTTCCTTCTCAACCTGCATTTGATGATATGATAGAGCTTCATGCTAGGTCATGCGCTTTTTGCTTTGGGAAGGAAAGCAGATGCTTTAATGGTAGAGAGTCTAATAAATGTGATGGCCAAGTGAATGGAAGCCCTGATGTTATTGATAATTTGCGCTATAACTCTGAGTCGTGTAATGATTCAAGTGATAATTCAGAATCATGTGATAAAGTATTTACTAATAGCGGTGAATCAAGTGACTCAAACGATGCTCCTGAAATTCTTAAAAAGCCCAGTTTTAAGTTTACTTTCCCCAGTGAAAAAAGTAGCGAAGCAAGGAAAAATAAAAAGTTCTCTGTTGCTCGGATTTCAAAGACAAAGTCTATAAGTGTAGATTTTCGGCTTTCACGGGGAATAGCAGAGGTTAACGAAGGGAAATATGCTCATGCTATATCCATTTTTGACCAGGAAAACAAGAAGCAATTATTTTGCCTAATTAGTGATTGTATCTATGAGTTCAACGCTTTTGGATCATGA | 1401 | 0.3854 | MNQYHIYEAIGRGRYSTVYKGRKKKTIEYFAIKSVDKSQKNKVLQEVRILHTLDHQNVLKFYSCVNSQEDLNIQNNKRFLAKSWDNLEELPDDHGDDIEEEIEDPKADFISADYEDEFQDIQLPEESVNELACDLVRALQYLHSNGIIYCDLKPSNILLDENGRTKLCDFGLARKLKEILKVPSSSLPQAKRGTPSYMAPELFEDGGVHSYASDFWALGCVLYECYSGRPPFVGREFTHLVKSIISDPTPPLPGNPSRPFVNLINSLFVKDLAERIQWPELCGHAFWKTKFSLVSLPSQPAFDDMIELHARSCAFCFGKESRCFNGRESNKCDGQVNGSPDVIDNLRYNSESCNDSSDNSESCDKVFTNSGESSDSNDAPEILKKPSFKFTFPSEKSSEARKNKKFSVARISKTKSISVDFRLSRGIAEVNEGKYAHAISIFDQENKKQLFCLISDCIYEFNAFGS | 466 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g09117 | 466 | MobiDBLite | consensus disorder prediction | 352 | 377 | - | - | |
Vifa1g09117 | 466 | MobiDBLite | consensus disorder prediction | 352 | 380 | - | - | |
Vifa1g09117 | 466 | PANTHER | SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED | 119 | 314 | IPR044591 | GO:0000911|GO:0000914|GO:0008017 | |
Vifa1g09117 | 466 | Gene3D | Transferase(Phosphotransferase) domain 1 | 111 | 293 | - | - | |
Vifa1g09117 | 466 | Pfam | Protein kinase domain | 4 | 286 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g09117 | 466 | ProSitePatterns | Protein kinases ATP-binding region signature. | 10 | 33 | IPR017441 | GO:0005524 | |
Vifa1g09117 | 466 | SMART | serkin_6 | 4 | 287 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g09117 | 466 | ProSiteProfiles | Protein kinase domain profile. | 4 | 287 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g09117 | 466 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 147 | 159 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa1g09117 | 466 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 75 | - | - | |
Vifa1g09117 | 466 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 301 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g09117 | Vifa-Chr1 | 1443828223 | 1443832495 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g09117 | 2 | 288 | MAP Kinase Kinase Kinase | AT3G13530 | 29.693 | 1.22e-30 | 124 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | ULK_ULK4 | Vifa1g09117 | Pkinase | 2.6e-52 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g09117 | K17545 | - | lang:109329212 | 462.996 |