Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09111 ATGACTTCGGATTTGGAAAATAATGAAAATAAGAATGCTAACAAAGGTAATATGTGGGATATGGAGCGGAAACTTGATCAACCGATGGACGAGGAAGCGGGAAAGCTCAAAAATATGCATAGAGAAAATAAGTTTTCTACACTGTTGGTTATTCGTCTTGCATATCAGAGTCTCGGTGTAGTTTATGGAGATTTGGGAACTTCTCCGTTATACGTTTTCTATAACACGTTCCCTCATGGAGTTGATGATCCAGAGGATGTGATCGGAGCTCTTTCGTTGATCATTTACTCGCTTACTCTTGTGCCGTTGCTCAAATATGTTTTTATTGTGTTACGAGCAAATGACAATGGTCAAGGTGGAACACTGGCTTTATATTCCTTGCTCTGCCGACACGCGAATATAAAAAGCATCCCCAACCAACATCACACGGATGAAGAGTTAACAACATATAGCCGGACTAAAATCCAGGAGAAATCGTTTGCTGCGAAAACCCAAAGATGGTTAGAGGGACCTCTTATTAAAAGTGCCCTTCTTATTCTTGTCCTTGTTGGCACCTGTATGGTGATTGGAGATGGTATTCTTACTCCGGCTATATCTGTTTTATCTGCTGCTGGTGGCATCAGAGTAAACAAACCTGAAATCGATAACGGAGTAGTTGTGATTATTGCTGTTGTAATTTTAGTTGGGCTATTCAGCGTGCAACATTACGGTACAGATAAAGTTGGCTGGCTCTTTGCTCCAATTGTTCTGGTTTGGTTACTCCTAATTGGAGGCATAGGTATATACAACATTTGGAGATTCGGTGGCAGAGTCCTAAGAGCCTTTTCGCCTCTCTATGTGTATCGGTATATGAGAAACGGAAAAAAAGAAAGTTGGCTTTCCCTTGGCGGCATCTTGCTCAGCATAACCGGGACAGAAGCTCTTTTTGCGGACTTAGCCAATTATCCAGTCTCATCGGTACAAATTGCATTTACTCTTCTTGTGTTTCCTTGCCTTCTTTTAGCATATTCTGGACAGGCGGCTTATCTGGTGAATAACTTGCATCAATCACAAGATGTTTTTTATTGCTCTATTCCAGACAAAATATACTGGCCAGTATTTGTTATTGCAACAATAGCAGCAATAGTTGCAAGCCAGGCCACAATAACAGCCACCTTTTCAATCATTAAGCAAGCTCTTGCTCATGGCTGTTTCCCAAGAGTCAAAGTTGTTCATACATCGAAAAAGTTCCTTGGCCAGATATATATTCCAGATATCAATTGGCTCCTTATGGTTCTTTGCATTGCTGTTACTACTGGCTTTAAAAATCAAAGTCAGATTGGAAATGCATATGGCACTGCAGTTGTGTTAGTCATGTTGGTTACAACACTGCTCATGATTTTGGTCATGATATTAGTTTGGCACTGCCATTGGATTCTTGTGATTGTGTTTACTGCCTTATCATTGATTGTGGAATGCACATACTTTTCTGCTGTAATCTTCAAAGTCGATCAAGGTGGGTGGGCGCCACTTGCAATTGCCGGAGTATTTCTGATTATTATGTATGTTTGGCATTATGGTACGCTGAAGCGTTACGAATTTGAATTGCATAGTAAAGTCTCAATGGCATGGATTCTTGGACTCGGTCCCAGTTTAGGACTAGTTCGTGTCCCTGGAACCGGCCTAGTGTACACAGAACTCGCAAGTGGAGTTCCCCATATATTTTCTCATTTTATTACCAACCTACCAGCCATTCATTCCGTTGTTGTTTTCGTCTGTGTGAAATATCTTCCCGTCTACACTGTCCCGGAAGACGAACGGTTCCTTGTCAAGCGTATCGGACCAAAGAACTTCCACATTTTTCGATGTGTGGCACGATATGGATATAAAGACCTGCATAAGAAAGACGACAAGTTTGAGAAGAAACTCTTTCACAACCTTTTCATGTTTGTTCGACTTGAATCCATGATGGAAGATTGTTCTGATTCGGAATACAGTTTATGTGAACCGCAAACCGAAGAGTCAAATAACAATGGAAACACAAATTCAGTGAGTAATGGGGATGTAACAATTTCATCTGTCGACTCAATAGTTCCTGCAAGATCGCCGCCACATGTGAATGTTACTTTTCAATCCTCTAGCCCTGGCACTGAGGTTGATGAATATGAATTTTTAAACAACTCTAGAGAAGCTGGTGTTGTTCACATACTAGGAAACACAATCGTGGTTGCTAGTAGGGATTCAAGATTCTACAAGAAAATAGCTGTTGATTATATATATGCATTTCTTAGAAAGATGTGCAGGGAAAATAGTGTGATCTTCAATATTCCTCATGAGAGTCTCTTAAATGTTGGTCAAGTTTTCTATGTATAG 2352 0.4048 MTSDLENNENKNANKGNMWDMERKLDQPMDEEAGKLKNMHRENKFSTLLVIRLAYQSLGVVYGDLGTSPLYVFYNTFPHGVDDPEDVIGALSLIIYSLTLVPLLKYVFIVLRANDNGQGGTLALYSLLCRHANIKSIPNQHHTDEELTTYSRTKIQEKSFAAKTQRWLEGPLIKSALLILVLVGTCMVIGDGILTPAISVLSAAGGIRVNKPEIDNGVVVIIAVVILVGLFSVQHYGTDKVGWLFAPIVLVWLLLIGGIGIYNIWRFGGRVLRAFSPLYVYRYMRNGKKESWLSLGGILLSITGTEALFADLANYPVSSVQIAFTLLVFPCLLLAYSGQAAYLVNNLHQSQDVFYCSIPDKIYWPVFVIATIAAIVASQATITATFSIIKQALAHGCFPRVKVVHTSKKFLGQIYIPDINWLLMVLCIAVTTGFKNQSQIGNAYGTAVVLVMLVTTLLMILVMILVWHCHWILVIVFTALSLIVECTYFSAVIFKVDQGGWAPLAIAGVFLIIMYVWHYGTLKRYEFELHSKVSMAWILGLGPSLGLVRVPGTGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEDERFLVKRIGPKNFHIFRCVARYGYKDLHKKDDKFEKKLFHNLFMFVRLESMMEDCSDSEYSLCEPQTEESNNNGNTNSVSNGDVTISSVDSIVPARSPPHVNVTFQSSSPGTEVDEYEFLNNSREAGVVHILGNTIVVASRDSRFYKKIAVDYIYAFLRKMCRENSVIFNIPHESLLNVGQVFYV 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09111 783 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 41 781 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa1g09111 783 Pfam K+ potassium transporter 55 624 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa1g09111 783 NCBIfam potassium uptake protein 53 783 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09111 Vifa-Chr1 1443445642 1443448645 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09111 6 783 Inorganic Solute Cotransporters AT2G35060 73.819 0.0 1164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09111 K03549 - gmx:100801093 1231.85