Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09107 ATGGTAAGGAACAATTTCAATTTTAGGGTTACAATCTTTCTATTTCTATTAGCATCATTACCACTAGTCTCATGTGAAGAATGTTCATCGAAATCGAAAGGTGGTTGTCACGATAGAAATGAAGCATTAAAGTTAAAGGTAATTGCAATATTTTGCATATTATTGTCGAGTATGATTGGCATTTGTCTTCCAATTTTCACAACTTCGATTCCGGCTTTAAAACCCGACGGAGACTTGTTCGTCATTGTAAAAGCTTTCGCCTCCGGTGTTATACTCGCTACCGGTTATATGCATGTGATGCCAGACTCATTTGCAGATTTAACTTCTCCTTGTTTGCCTCAACAGCCTTGGCATAAATTTCCATTCACCACTTTCATTGCTATGATTTCCGCTGTTTTTACTCTCATGGTTGATTCATTTTCTATAAGTTACTTTAAAAAGAAACTTCCTATGTCTTCTTCTTTGAATAATTTGGACACGACAAAGGAATTGGAACATGGTCATGGTCATGGTCTTGCAGTTGTAAATGGACATGACAAGAATGTAACTGCCGAACAACTGATGCGTTACCGTGTTGTGGCTCAGGTTTTGGAGTTAGGAATTGTGGTGCACTCAGTGGTGATTGGTTTGTCATTGGGTGCTTCGGAAAACCCATGCACAATAAAGCCTCTCATTGCTGCCCTTTGCTTCCATCAACTCTTTGAGGGAATGGGTTTGGGTGGTTGCATACTTCAGGCTGATTATGGAGTGAAGATGAAAGGGATAATGGTATTTTTTTTCTCAGTGACGACGCCATTTGGGATAATATTAGGGATTGGTTTATCGAAAGTGTATAGTGACACAAGTCCAACTGCACTAATTGTAGAAGGGATTCTGAATGCTATATCTGCAGGACTTCTCAATTATATGGCACTTGTTGATTTATTGGCTAATGATTTTATGGGTGCCAAGTTACAAAGTAGAATCAAGCTTCAATTATGGTCTTATGTAGCTGTCTTGCTAGGCGCAGGAGGCATGTCAGTGTTGGCTATTTGGGCCTAA 1041 0.3939 MVRNNFNFRVTIFLFLLASLPLVSCEECSSKSKGGCHDRNEALKLKVIAIFCILLSSMIGICLPIFTTSIPALKPDGDLFVIVKAFASGVILATGYMHVMPDSFADLTSPCLPQQPWHKFPFTTFIAMISAVFTLMVDSFSISYFKKKLPMSSSLNNLDTTKELEHGHGHGLAVVNGHDKNVTAEQLMRYRVVAQVLELGIVVHSVVIGLSLGASENPCTIKPLIAALCFHQLFEGMGLGGCILQADYGVKMKGIMVFFFSVTTPFGIILGIGLSKVYSDTSPTALIVEGILNAISAGLLNYMALVDLLANDFMGAKLQSRIKLQLWSYVAVLLGAGGMSVLAIWA 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09107 346 PANTHER ZINC/IRON TRANSPORTER 42 339 - -
Vifa1g09107 346 Pfam ZIP Zinc transporter 44 343 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vifa1g09107 346 NCBIfam ZIP zinc/iron transport family 28 346 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09107 Vifa-Chr1 1442758344 1442759564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09107 1 346 Inorganic Solute Cotransporters AT1G31260 56.319 1.25e-138 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09107 K14709 - gmx:100784872 472.626