Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09069 ATGATAGGAGACGGCATAAACGATGCTCTGGCATTAGCTACAGCTGACATAGGCATCTCAATGGGAATATCAGGATCAGCTCTTGCAAACGAGACAAGCAACGCGATTCTGATGTCGAACGACATCCGAAAAGTGCCTGAGGCGATTCGTCTAGCAAGGAAAACAAGTAGGAAGCTCATTGAGAATGTTGTTATTTCGGTTGGATTCAAAAGTGGCATACTTGCATTGGCAATTGCAGGATATCCATTAGTTTGGCTTGCTGTTTTGACTGATGTTGGAACATGTTTACTTGTGATTCTTAATAGCATGTTGATTTTACAAGAGAATCATAAATATGAAGAAAGAGAATCAGGTAGGTCTAAATATGGCAAGTTTTTTGAAGATAAGACTAAACCATTACTTAACAAGGAAAGTAATATTGATGAGGAAAAAGGGCTTATTGGTGGTGAAGAGTGTGGTAAAGAGTGTTGTATAAATGTCACTCATCACGTGGAAACTACAAAAGAAAACAAAGATGAATCTAGTAGAGTTTCAAACTTGAGCTTACTCAATGGAAATGACAATGGAAACTCTATGTTTGTTGAAGTTCATGTTATGAAGCCATGCAATGGTTGA 615 0.3789 MIGDGINDALALATADIGISMGISGSALANETSNAILMSNDIRKVPEAIRLARKTSRKLIENVVISVGFKSGILALAIAGYPLVWLAVLTDVGTCLLVILNSMLILQENHKYEERESGRSKYGKFFEDKTKPLLNKESNIDEEKGLIGGEECGKECCINVTHHVETTKENKDESSRVSNLSLLNGNDNGNSMFVEVHVMKPCNG 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09069 204 ProSitePatterns Hypothetical cof family signature 2. 2 24 - -
Vifa1g09069 204 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 1 108 - -
Vifa1g09069 204 SUPERFAMILY HAD-like 1 103 IPR036412 -
Vifa1g09069 204 PRINTS P-type cation-transporting ATPase superfamily signature 2 21 - -
Vifa1g09069 204 PRINTS P-type cation-transporting ATPase superfamily signature 26 38 - -
Vifa1g09069 204 Gene3D - 1 70 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09069 Vifa-Chr1 1436378910 1436379524 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09069 1 157 Primary Pumps ATPases AT2G19110 55.625 2.32e-51 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09069 K01534 - gmx:100815324 283.878