Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09051 ATGGAACAGATGAGTAGAGTTGTGAGTGAGTTGGATTCTATCCATTTCTCTATAAAGAAAGCATCTAAGTTGGTCAAAGAAATCGATAGTGGGTTGCTACTGACAAGTGTATTATGGCATTGCTTTTCCTTTTTGTCATTGGAGGGTCGTTTTGAGATACTTTCTTTGGCTGGATCCTTCATGCTTACTGATAACGAAGGAACAAGAAGAAGGGCAGGTGGAATGACCATCTCACTGGAAACCTCCGGTGGCCGCGTTGTTGGTGGAGGAGTTGTTGGTGTGTTAGTGCAAGTTGTCACTCTTATGCAGGGACAGAAAATGGGAATACCTCAAACATTACTATGGGTTAATCGTCTATCATGA 363 0.4242 MEQMSRVVSELDSIHFSIKKASKLVKEIDSGLLLTSVLWHCFSFLSLEGRFEILSLAGSFMLTDNEGTRRRAGGMTISLETSGGRVVGGGVVGVLVQVVTLMQGQKMGIPQTLLWVNRLS 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09051 120 SUPERFAMILY AF0104/ALDC/Ptd012-like 44 99 - -
Vifa1g09051 120 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 45 96 IPR039605 GO:0003680
Vifa1g09051 120 Gene3D - 8 107 - -
Vifa1g09051 120 ProSiteProfiles PPC domain profile profile. 1 120 IPR005175 -
Vifa1g09051 120 Pfam Plants and Prokaryotes Conserved (PCC) domain 38 99 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09051 Vifa-Chr1 1433838179 1433845637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09051 45 96 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 65.385 5.25e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09051 - - psat:127075781 58.9214