Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09019 ATGGAAGGCCAAAAAGCTAAACGCAAACGTGTTTATTCAGTTGAACCAAACAAAGTAGTGCAAGCAAAGTTTACTAGAAGCTACATGAACTACTTAGCACCAGCTTTGAAGAAAATCAAAGAAAGAAGAAGTTCTATGGAAGCTAAGAAAGTTGAAAATATTGTGAAATATGAAGTGGACATGGCTATGGTTATTTCATCTCAAGGTTTTGCATGGAGTAATGCTCTAAAAACTAAGCTTCAAAAGAATGGTGATGAAGGTTCATCAAGGGTTAGTAATAATTATCAAGAAAATCAAATGAGCCAAGTTGGTTTTTCTAAGCAAGATTGTTTGAAATCTGAGGGTAGTGAGATTTTGGTTGGAGAAAATGATGAAGATGAAGATGAACAATTGAGATGTCTTAGAAAATTGTTACCAGGAGGAGAAGAAATTAGGTGTGATGATGAAATGGTGAGTGAGTTAGAGAGTTATGTAAGTTGTTTACAAATGCAGGTTAATATTCTTAAGTGTCTCACTGATTATTAG 525 0.341 MEGQKAKRKRVYSVEPNKVVQAKFTRSYMNYLAPALKKIKERRSSMEAKKVENIVKYEVDMAMVISSQGFAWSNALKTKLQKNGDEGSSRVSNNYQENQMSQVGFSKQDCLKSEGSEILVGENDEDEDEQLRCLRKLLPGGEEIRCDDEMVSELESYVSCLQMQVNILKCLTDY 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09019 174 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 24 173 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09019 Vifa-Chr1 1431894942 1431895466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09019 7 172 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 37.209 5.70e-24 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09019 - - aprc:113852314 177.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04474 4 1412700731 1412701174 Vifa1g09019 1 1431894942 1431895466 PCT