Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09008 ATGGATCCTAATCATTTTCATTATCAACAAGTTATGTTCAATTTCATGCAAAATTATCAAAATCCTAATTCTCAAAATTCTCAAATTCCATCAGTACCACCAAACTCCGCCATATTTTTTCCGTCACCAAACAATCCAAATATGTATCAAAATCCTAATCCTCAAAATTCTCAAGTTCCACCATTTTCTACTCAAGTTGGTGTTGAAAAAGAAGAAATGGATCCAATTGTGGGAGTTGATCAAAAAGCTGAGAGTTTTTGGCATAGAATCGCTGCAAATTATAACCAGTATCGCGGGCAATTGCGAGAAAAGTTAAGTGGTCAATTAAAATGTCGATGGCATCGAATAAATGCGTCGGTTCAAAAATTTGTTGGGTGTTATAGACAAGTTGTCAATAGAAAGAAAAGTGGGACATCGAAGAACGATATCATGGCTGCTGCACATGCTTTTTATGCTCAAGATCAAGGTACAACATTCAATCTTGAGTATGCATGGCGATTGTTAAAAGATGAAGCTAAATGGGGCATCATCGGAGAATCGACTGGAAATTCTTCAAAAATGACACAGACTTCTGCTAGTGGGGCATCATCGGAGATCCCTGATACACCTTCAAGTTATGAGTTTAACTCATCATCACCAATGGAGCGTCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGGCAAAGGAAATTTCAAATGCAACGCAAGATGCAAGGAATAAAAGAGCAGAAACAATGGAAAGACTTGCGCAAAGTAAGGAGGACGAGATAGAATTAAAAGTAATGCAAATCATGATGAAAGACACTTCTACTATGAACGAAAGTCAACGAGATATTCATGAAAAATATTGTAATAAAATGAAGAAGAAAAAATATGGACTGTAG 888 0.366 MDPNHFHYQQVMFNFMQNYQNPNSQNSQIPSVPPNSAIFFPSPNNPNMYQNPNPQNSQVPPFSTQVGVEKEEMDPIVGVDQKAESFWHRIAANYNQYRGQLREKLSGQLKCRWHRINASVQKFVGCYRQVVNRKKSGTSKNDIMAAAHAFYAQDQGTTFNLEYAWRLLKDEAKWGIIGESTGNSSKMTQTSASGASSEIPDTPSSYEFNSSSPMERPMGQKAAKRKGKAKEISNATQDARNKRAETMERLAQSKEDEIELKVMQIMMKDTSTMNESQRDIHEKYCNKMKKKKYGL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09008 295 MobiDBLite consensus disorder prediction 180 216 - -
Vifa1g09008 295 Pfam No apical meristem-associated C-terminal domain 158 279 IPR029466 -
Vifa1g09008 295 MobiDBLite consensus disorder prediction 180 244 - -
Vifa1g09008 295 PANTHER - 42 291 - -
Vifa1g09008 295 MobiDBLite consensus disorder prediction 219 244 - -
Vifa1g09008 295 Coils Coil 236 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09008 Vifa-Chr1 1429325182 1429326154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09008 3 228 Glutathione S-transferase Gene Family AT5G41240 28.340 2.03e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09008 - - psat:127115199 361.303