Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08979 ATGTCAAAGTCTTTTTGTTTCTTTGCCATCTTGGTTTTAATTCTTGCAGTTCAAATTAACGAGATAGAATGTGGTGAATGCTCACAAATTGCGGGTAAATGTGGTGAGGCAGAAGATTGTACTACACGGTGTAATTCTTATGGAGGTGGTGTTCGTGTTTTAAAAGCATCATGCTCGTTCTTAAACTTATGCACTTGTAGTTTCGAACGACCACCACCAACAATAGCAGCACCTCCTTGCCTTATTGGGTTGGGAGTTTGCACTAATGAACATAATGAAGAATGGTGTAAGAAAGAGTGTCAAACTAAACATCCTAACACGAGTTTTGGGGTCTGTGTAAAACTATTTGATCAGAATATTTGCACTTGTGTGTATTACAGTTGA 384 0.3828 MSKSFCFFAILVLILAVQINEIECGECSQIAGKCGEAEDCTTRCNSYGGGVRVLKASCSFLNLCTCSFERPPPTIAAPPCLIGLGVCTNEHNEEWCKKECQTKHPNTSFGVCVKLFDQNICTCVYYS 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08979 127 PANTHER DEFENSIN-LIKE PROTEIN 183 2 125 IPR039641 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08979 Vifa-Chr1 1423572883 1423573342 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08979 4 125 Plant Defensins Gene Families AT5G38330 29.268 4.07e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08979 - K23342 psat:127114126 137.887