Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08978 ATGGCAAACCAAATGTCAAAGTCTTTCTGTTTCTTTGCTCTGATGGCTTTATTTTTTGCAGTTCAATTTATTCAGATAGACGGTGATGAGTGCACAAAAATTGTGGGTAACTGTGAGGTAGCTGATTGCACTGATCAATGTAATTCATTTGCCGAAGGGCGTGCGAATGTTTTAAAAGCATCATGCTCATTCTTAAACTTATGCACTTGTACTTTTGATCGACCACCACCAATAACAATTCCAACACCTACTTGCGATATTGGATTGGGAGTTTGCGGTAATGCCTGTAACTATGATTGTTGCCAAGAAAAGTGTCAAAGTAGATATTCTAAGACGAGTTTGGGGAGATGTAGAAAAATCTTTAATCGAGATATTTGCCTTTGTACCTATGCCCCTTGA 399 0.3835 MANQMSKSFCFFALMALFFAVQFIQIDGDECTKIVGNCEVADCTDQCNSFAEGRANVLKASCSFLNLCTCTFDRPPPITIPTPTCDIGLGVCGNACNYDCCQEKCQSRYSKTSLGRCRKIFNRDICLCTYAP 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08978 132 PANTHER DEFENSIN-LIKE PROTEIN 183 1 131 IPR039641 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08978 Vifa-Chr1 1423147930 1423148414 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08978 8 130 Plant Defensins Gene Families AT5G38330 30.233 8.52e-08 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08978 - K23342 psat:127114126 152.91