Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08977 ATGTCCAACTTTTTCTTTTTCTTTGCGCTCTTGGTTATAGTTTTTGCAGTTCAATTTATTCAAATAGATGGTGAATGCACAAAAGTTTTGAGTAAGTGTGAGACTTCGGATTGTAATGATACGTGTAATTCATATGCAGAAGGTGTTCGTGTTTTAAATGCATCGTGTTCATCCTTAAACTTATGCACCTGTACTTTCGATCGGCCACCACCAGAAGGACCAACACCTCCTTGCGATGTTGTGTTGGGAGTTTGCACTGATTCCTGTAACAATGAATGTTGCAACAACAAATGTAAAAGTAGTTTTCCTAACACGGGTAGTGGGGCATGTATATTAGCCTTTGATAGGGATCTTTGCATGTGTACTTATAACCGTTGA 378 0.3862 MSNFFFFFALLVIVFAVQFIQIDGECTKVLSKCETSDCNDTCNSYAEGVRVLNASCSSLNLCTCTFDRPPPEGPTPPCDVVLGVCTDSCNNECCNNKCKSSFPNTGSGACILAFDRDLCMCTYNR 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08977 125 PANTHER DEFENSIN-LIKE PROTEIN 183 2 124 IPR039641 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08977 Vifa-Chr1 1422918939 1422919400 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08977 61 123 Plant Defensins Gene Families AT5G38330 42.857 1.92e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08977 - K22023 psat:127114126 210.305