Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08976 ATGGCAAACCAAATGTCAAACTTTTTCTGCTTCTTTGCCCTCTTGGTTATAGTTTTTGCAGTTCAATTTATTCAGATAGATGGTGAATGCTCAAAACTTGTGGGTAACTGTGAGACTTCAGATTGTAATAAACTGTGTAATTTTAAAGCAAGAGGTGTTGGTGTTATAAATGCATCGTGTTCATCCTTACACTTATGCACTTGTACTTTCGATCGGCCACCACCAGGAGGACCAACACCTCCTTGCGATTTTGTGTTGGGACTTTGCACTAATTCTTGTAACTATGATTGTTGCGACAAAAAGTGTAAAGGTAGTTTTCCTAATACGGGTAGTGGGACATGTATACAAGTATGGGGTCGGGATCTTTGCATGTGTTCTTATACCCGTTGA 390 0.3949 MANQMSNFFCFFALLVIVFAVQFIQIDGECSKLVGNCETSDCNKLCNFKARGVGVINASCSSLHLCTCTFDRPPPGGPTPPCDFVLGLCTNSCNYDCCDKKCKGSFPNTGSGTCIQVWGRDLCMCSYTR 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08976 129 PANTHER DEFENSIN-LIKE PROTEIN 183 1 128 IPR039641 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08976 Vifa-Chr1 1422647249 1422647724 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08976 15 127 Plant Defensins Gene Families AT5G38330 34.188 1.10e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08976 - K19919 psat:127114126 220.32