Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08934 ATGGCAACACAACCTGAATTTGAACATCCTAAAAAAGCCTTTGGTTGGGCAGCTAGAGATCCTTCTGGTGTTTTCTCACCTTTCAATTTCTCTAGAAGGGAAACAGGTGAGAAAGATGTGGCATTCAAGATATTGTATTTAATTAGTACTTCGCCTAATAAAGAAAATGAAGCAATTGAACACTTAGGAGCTGATTCATTTCTGTTAAGCCGTAACGTGAATCAAATGAAGGCTGCAATTGGTACTTTGGACGGTATTATTGACACAGTTTCAGCAGAACATCCTCTCTTACCACTGATTGGTTTACTCAAATCTCATGGAAAACTTGTAATGGTTGGTGCAGTAGTGAAGCCTCTAGAGCTTCCTGTATATGCTTTACTTGAAGGGAGAAAGTTAATAGCTGGGAGTAATATTGGAGGGATAAAGGAGACACAAGAAATGATTGATTTTGCAGCTCAACATGATGTGAAACCTGATATTGAGATTGTTCCGATTGATTATGTTAACACAGCAATGGAGCGTCTGGCTAAAGCGGATGTGAAATATCGATTTGTGATTGATATTGGAAACACATTGAAGCCAAGCTCTTAA 591 0.3841 MATQPEFEHPKKAFGWAARDPSGVFSPFNFSRRETGEKDVAFKILYLISTSPNKENEAIEHLGADSFLLSRNVNQMKAAIGTLDGIIDTVSAEHPLLPLIGLLKSHGKLVMVGAVVKPLELPVYALLEGRKLIAGSNIGGIKETQEMIDFAAQHDVKPDIEIVPIDYVNTAMERLAKADVKYRFVIDIGNTLKPSS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08934 196 Gene3D - 46 158 - -
Vifa1g08934 196 FunFam Cinnamyl alcohol dehydrogenase 40 158 - -
Vifa1g08934 196 PANTHER ALDEHYDE REDUCTASE 5 46 IPR047109 GO:0016616
Vifa1g08934 196 Pfam Zinc-binding dehydrogenase 47 152 IPR013149 -
Vifa1g08934 196 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 46 157 IPR036291 -
Vifa1g08934 196 Gene3D - 159 188 - -
Vifa1g08934 196 FunFam Putative cinnamyl alcohol dehydrogenase 6 159 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08934 Vifa-Chr1 1415600526 1415606347 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08934 11 47 Monolignol Biosynthesis Gene Families AT4G37990 70.270 8.20e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08934 K23232 - mtr:11426261 256.144