Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g08830 | ATGGATGATTTCGGTGAAAAGTATTTCTACCTAGTGAACGGATGCAAATACAGAGTATGGCCAGCTTCCTCTTCTACCGCTGGAAACACACATCTTGAAATAGGCAACTTCAGTTTAAACACGGGCGACGAGTTCAAAGTTTGGGCTCCTTCGACTTGGAGCGGCCACATTTGGGGCCGAACTCGCTGCATTAATAATTTATCCACGGGAGGAAACTTCTCATGCATTACCGGCGATTGCGGTACTGGGAAGCAGTCATGCGATGGGATGCGAGGCCTGCCGCTCGCCACGCTAGCAGAATTCCGTTTAAGCAACAACAGTGGTGCTCATTTTTATAACATTAGTGTTATAGAAGGTTTCAATATCCCTATAGAGGTGACTACTATGGGTGCTTCTTGTGGGTACCAGAATCGCAATGGGACAAACACGTTTACTTGTTCATTTAATGTTTACAAGATCATGTTTTGCCCAGCTTTCAGCACGGGAACTTTCGATCAGAGTGTGAGTGTAGGTGAGTCACTCACTGCTGGCAATGGGACAGATCGATGGCTTTCTCTTTCGGGAGAGTTTGCTTTTGGATTTTATCAACTTCCTAATGATCTTTTCTTACTAGCTATATGGTATGAAAAGATAAATAGTACTGATTCTATTATTTGGTATGCAAAAGGTGACAATCCTATTCCAAATGGATCAAGATTAGTATTAAATGACTCTCATGGGTTGATGCTTTCCAACCCTCAAGGTTTAGAGTTATGGAGATCATCCTATTTTACTTCAAGTAGAGTTTCAATTGGTCTAATGAAGGATGATGGAAATTTTCAATTATTAGACCAAAATAAGGTTATATTATGGAAGAGTTTCAGTGATTCTACCGACACATTAGTTCCTGGTCAAGAATTGAATTCAAATAGCTACCTATATTCTCGAAAAGGAGAATTCAACTTCTCACGTGGAATGTTTGAACTTTCTTTACAGAAAAATGGGCATGGTTTACTCCTTAACCATGTAAATTTTCCTACAAAGACATACTACAGTACTCATAGTGGCGTTTTCAATGAAAGTGGTGTTGTTGATCCAAATAATGGTGACAAATTGATATTTGACAACTCACTCTTCTACTTATACATACTTAAAAGGAATGGAGGAAAAATTTCTATCACCGATCCAAAAGATTATGTTTCAAATAATGCATACTACTACAAAGCCACTATCACTTATGATGGTGTTTTTACCCTCTCATATCACCCTAAATATCAAAACAATAGTCAAGGATGGGTAATTGAAAAGACAATCCCAGAAAACATTTGTTTGGATTCTACATTCAACAAAGGTCCTGGTGTGTGTGGGTTGAATAGCATTTGCACCCTCATAAACCAAAGGCCAGTGTGTACATGTCCAGAAGGATATTCTCTAATGGACTCAAATAACATTTATGGTGGTTGCATACAAAATTCCCACGTCACTTGTCAAGGTAGGAATCAAGGGTCCCAAAATGATACACATGTGATGATGAAAATTCCTGAAACTTATTGGCCTTATTCTGACTATGAAACAAAGAGGCATAGTAGCTTACAAGATTGCACAGATTCTTGTTTGAAAGACTGCTTATGTGCATTGGTATTTTTCAATGAAAGTTCTTGTTTGAAGAAGAAACTACCACTCTCACATGGGAGAAAGGATATCTCAATACAAGGAATTTCTATCATGAAAATGAGAAAAAATGATACTCTACACTCCCCTCCCAATTTGATGAAAGGTAATGGTACTTTGATCAATGTGATGTCAATTATTTTTGGATTCTCCATTGCTATAGTTATAACATTGGTTGGTGCAATTTTTTATTGGTACAACTCAAAGAAGATAAAAAGTAGCACAATCAATAAAAGAGTTGTTGATAGAAGTTTGAGAATATTTTCTTTCAAGGAAATTACACAAGTAACAAACAATTTCAGGGAAGAATTAGGAAGAGGGTCTTGTAGCATTGTATACAAAGGAATGGTAGATGTGGATACTTATGTTGCAGTAAAAAAACTGGACAAGTTGTTTCAAGATAGTGATAAGGAATTTCAAACTGAAATGAATGTCATAATCAAAACTCATCATAGGAACCTTGTACGTCTTCATGGGTATTGTAGCGAAGATCAACACAGGATTTTGGTGTATGAGTTAATGAGTAATGGTACTTTAGCAACATTTCTTTTCACACCTTTGAAACCAAACTGGAACCAACGAGTTCAAATTGCCATTGGGATTGCAAGAGGTCTTGTTTACTTGCATGAAGAATGTTCCACCCAAATAATCCACTGTGACATAAAGCCACAAAACATTCTTCTTGATGATGACTACAATGCCAGGATTTCCGATTTTGGGTTAGCAAAACTATTATTGATTAATCAAAGTCACACAAAAACCGGAATCAGAGGAACCAAAGGTTATGTTGCACCAGATTGGTTTAGGAGTGCACCTATCACTTCTAAGGTTGATGCTTTTAGTTTTGGTGTGTTGTTACTAGAGATAATTTGTTGTAGGAAAAATGTAGAGGATGATACTGTCAGTGAAGAAAAAAGGATTTTAATTGATTGGGCATATGATTGCTACAAGACTGGAAAAATAGACGTTCTTTTAGAAAATGAACATGGGACAGTCAATGATATGAGTATATTTGAAAATTTTATCATGATTTCTATTTGGTGCACTCAAGAAGATCCATCTCTAAGACCACCAATGAAGAAGGTTTTGTTAATGCTAGAAGGGATTGTTGAAGTTGAAATTCCTCCAAATCCCTACTTGTATGATTCTTCTAATCAAAGTTAG | 2814 | 0.3678 | MDDFGEKYFYLVNGCKYRVWPASSSTAGNTHLEIGNFSLNTGDEFKVWAPSTWSGHIWGRTRCINNLSTGGNFSCITGDCGTGKQSCDGMRGLPLATLAEFRLSNNSGAHFYNISVIEGFNIPIEVTTMGASCGYQNRNGTNTFTCSFNVYKIMFCPAFSTGTFDQSVSVGESLTAGNGTDRWLSLSGEFAFGFYQLPNDLFLLAIWYEKINSTDSIIWYAKGDNPIPNGSRLVLNDSHGLMLSNPQGLELWRSSYFTSSRVSIGLMKDDGNFQLLDQNKVILWKSFSDSTDTLVPGQELNSNSYLYSRKGEFNFSRGMFELSLQKNGHGLLLNHVNFPTKTYYSTHSGVFNESGVVDPNNGDKLIFDNSLFYLYILKRNGGKISITDPKDYVSNNAYYYKATITYDGVFTLSYHPKYQNNSQGWVIEKTIPENICLDSTFNKGPGVCGLNSICTLINQRPVCTCPEGYSLMDSNNIYGGCIQNSHVTCQGRNQGSQNDTHVMMKIPETYWPYSDYETKRHSSLQDCTDSCLKDCLCALVFFNESSCLKKKLPLSHGRKDISIQGISIMKMRKNDTLHSPPNLMKGNGTLINVMSIIFGFSIAIVITLVGAIFYWYNSKKIKSSTINKRVVDRSLRIFSFKEITQVTNNFREELGRGSCSIVYKGMVDVDTYVAVKKLDKLFQDSDKEFQTEMNVIIKTHHRNLVRLHGYCSEDQHRILVYELMSNGTLATFLFTPLKPNWNQRVQIAIGIARGLVYLHEECSTQIIHCDIKPQNILLDDDYNARISDFGLAKLLLINQSHTKTGIRGTKGYVAPDWFRSAPITSKVDAFSFGVLLLEIICCRKNVEDDTVSEEKRILIDWAYDCYKTGKIDVLLENEHGTVNDMSIFENFIMISIWCTQEDPSLRPPMKKVLLMLEGIVEVEIPPNPYLYDSSNQS | 937 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g08830 | 937 | Pfam | Protein kinase domain | 651 | 913 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g08830 | 937 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 766 | 778 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa1g08830 | 937 | Pfam | Thaumatin family | 13 | 136 | IPR001938 | - | |
Vifa1g08830 | 937 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 202 | 343 | IPR036426 | - | |
Vifa1g08830 | 937 | PRINTS | Pathogenesis-related protein signature | 110 | 126 | IPR001938 | - | |
Vifa1g08830 | 937 | PRINTS | Pathogenesis-related protein signature | 56 | 67 | IPR001938 | - | |
Vifa1g08830 | 937 | PRINTS | Pathogenesis-related protein signature | 8 | 20 | IPR001938 | - | |
Vifa1g08830 | 937 | ProSiteProfiles | Protein kinase domain profile. | 648 | 930 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g08830 | 937 | ProSitePatterns | Thaumatin family signature. | 71 | 87 | IPR017949 | - | |
Vifa1g08830 | 937 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 174 | 927 | - | - | |
Vifa1g08830 | 937 | SUPERFAMILY | Protein kinase-like (PK-like) | 629 | 917 | IPR011009 | - | |
Vifa1g08830 | 937 | FunFam | S-receptor-like serine/threonine-protein kinase | 617 | 723 | - | - | |
Vifa1g08830 | 937 | Gene3D | Phosphorylase Kinase; domain 1 | 612 | 723 | - | - | |
Vifa1g08830 | 937 | PIRSF | SRK | 140 | 937 | IPR024171 | GO:0004674 | |
Vifa1g08830 | 937 | ProSiteProfiles | Bulb-type lectin domain profile. | 159 | 288 | IPR001480 | - | |
Vifa1g08830 | 937 | SUPERFAMILY | Osmotin, thaumatin-like protein | 8 | 157 | IPR037176 | - | |
Vifa1g08830 | 937 | Gene3D | - | 290 | 440 | - | - | |
Vifa1g08830 | 937 | SMART | tha2 | 9 | 157 | IPR001938 | - | |
Vifa1g08830 | 937 | ProSiteProfiles | Thaumatin family profile. | 9 | 161 | IPR001938 | - | |
Vifa1g08830 | 937 | Pfam | D-mannose binding lectin | 217 | 304 | IPR001480 | - | |
Vifa1g08830 | 937 | CDD | B_lectin | 165 | 287 | IPR001480 | - | |
Vifa1g08830 | 937 | Gene3D | - | 162 | 289 | IPR036426 | - | |
Vifa1g08830 | 937 | SMART | serkin_6 | 648 | 916 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g08830 | 937 | SMART | blect_4 | 165 | 290 | IPR001480 | - | |
Vifa1g08830 | 937 | Gene3D | Transferase(Phosphotransferase) domain 1 | 724 | 924 | - | - | |
Vifa1g08830 | 937 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 724 | 924 | - | - | |
Vifa1g08830 | 937 | Gene3D | Thaumatin | 8 | 157 | IPR037176 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g08830 | Vifa-Chr1 | 1395809591 | 1395812523 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g08830 | 611 | 918 | Receptor kinase-like Gene Family | AT1G60800 | 39.875 | 2.29e-71 | 245 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Vifa1g08830 | Pkinase | 2.8e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g08830 | - | - | mtr:25487002 | 1030.01 |