Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08795 ATGAGGAGCTGTTTCTTCAACCCTTGGGTATTGGTTTCCCTCGTTCTAGTCCTTCCCGTTCTTCTCTCTCTCAGAAACCCTCGCGGTGAACCAGAGAACACCATAACCCCAACAACCACTTCTTTTGGTACCGTGAAGTTGGCCAACACTTTTCCTTTTCAGTTCAATCAGAGGATCAGAGATGGGTCCAATCTTGAATATGATTTCTATAGGAATACCTGTCCTCAAGCTGAGGATATTGTTCGTTCTGCTGTTACTGATATCTACTTTGATCATAGAGATCTTTCGCCGTCGCTTCTTCGTCTCTTCTTTCATGATTGCTTCATTCAGGGGTGTGATGCTTCATTGCTATTGGAGGACAATGGTAATGGAAACAGTTCCTCTGAGAAGCAAGCTATTCCAAATCAGACATTGAAAGGTTTTGACAGAATTGACATGATTAAGGAGGAAGTTGAACAAGCATGTCCTGGCGTTGTGTCTTGCGCCGATATACTTGCTCTTGCAGCAAGAGATTCCGTTCTTTTGGCTGGCGGGCCTTTCTATCCAGTATTAACAGGCAGACGAGATAGCCTTCAATCGTTTTTCGAGGATGCAACTGATCAAATTCCAAAGCCTGACGATAACATTACTCGCACGCTCCACCTCTTCAATCTTAGGGGATTCAGTGCACGGGAAACAGTCAGCCTTCTTGGAGGACACAACATTGGAAGAATCAGTTGTGATTTCATTCAACAAAGGCTGTACAACTTTCAAGGAACAGGACAACCAGACCCGAGTATACCTCTCGATTTCCTCAGTCAGATGAGGCAAAACTGTCCAGACAACAGAAGTATCAGTAGTAGCAGCACTGGCAAGTTTTCGACGGAGTTTACAACTTCGCCAATGAATGTTCATCATCACTCTAATAAAAAAGGAATGTCATACACGCAAGCATTGTCTGCAGTGTCATCTGGAGCATCATTCGACACTCACTACTACCAAAGCTTGTTGAGAGGTAGAGGGCTACTGTTTGCTGATCAGCAGCTGATGGCTGAGGAGAGGACTGCCAGACTGGTTTCTGCTTATGCTTCAGATGACGGATCGACCTTTCGGATGGATTTTGCTAGGGTTATGTTGAAACTGTCTAATCTTGATGTTTTGACTGGAAATCAAGGTCAGGTTCGTCTGAACTGCTCCCAACTCATAGGTTCTTAA 1194 0.4447 MRSCFFNPWVLVSLVLVLPVLLSLRNPRGEPENTITPTTTSFGTVKLANTFPFQFNQRIRDGSNLEYDFYRNTCPQAEDIVRSAVTDIYFDHRDLSPSLLRLFFHDCFIQGCDASLLLEDNGNGNSSSEKQAIPNQTLKGFDRIDMIKEEVEQACPGVVSCADILALAARDSVLLAGGPFYPVLTGRRDSLQSFFEDATDQIPKPDDNITRTLHLFNLRGFSARETVSLLGGHNIGRISCDFIQQRLYNFQGTGQPDPSIPLDFLSQMRQNCPDNRSISSSSTGKFSTEFTTSPMNVHHHSNKKGMSYTQALSAVSSGASFDTHYYQSLLRGRGLLFADQQLMAEERTARLVSAYASDDGSTFRMDFARVMLKLSNLDVLTGNQGQVRLNCSQLIGS 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08795 397 CDD secretory_peroxidase 64 392 IPR033905 GO:0004601|GO:0042744
Vifa1g08795 397 ProSitePatterns Peroxidases active site signature. 96 107 IPR019794 GO:0004601
Vifa1g08795 397 PRINTS Plant peroxidase signature 139 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g08795 397 PRINTS Plant peroxidase signature 74 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g08795 397 PRINTS Plant peroxidase signature 224 236 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g08795 397 PRINTS Plant peroxidase signature 328 345 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g08795 397 PRINTS Plant peroxidase signature 312 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g08795 397 PRINTS Plant peroxidase signature 369 382 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g08795 397 PRINTS Plant peroxidase signature 98 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g08795 397 PRINTS Plant peroxidase signature 158 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g08795 397 PRINTS Plant peroxidase signature 177 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g08795 397 ProSiteProfiles Plant heme peroxidase family profile. 64 395 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g08795 397 Gene3D Peroxidase, domain 2 304 375 - -
Vifa1g08795 397 PANTHER PEROXIDASE 25-RELATED 22 383 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g08795 397 Gene3D - 69 202 - -
Vifa1g08795 397 Pfam Peroxidase 81 358 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g08795 397 Gene3D Peroxidase, domain 2 203 281 - -
Vifa1g08795 397 PRINTS Haem peroxidase superfamily signature 159 176 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g08795 397 PRINTS Haem peroxidase superfamily signature 177 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g08795 397 PRINTS Haem peroxidase superfamily signature 225 240 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g08795 397 PRINTS Haem peroxidase superfamily signature 96 110 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g08795 397 PRINTS Haem peroxidase superfamily signature 314 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g08795 397 SUPERFAMILY Heme-dependent peroxidases 65 393 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa1g08795 397 Gene3D - 376 392 - -
Vifa1g08795 397 FunFam Peroxidase 68 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08795 Vifa-Chr1 1389528218 1389530662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08795 61 395 Peroxidase AT4G33870 46.512 1.11e-99 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08795 K00430 - gmx:100804973 587.415