Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08759 ATGCTCGATCAAATCCCAAGTTTGACGGAATTGCAGCAGAGCCCAGAAAGGGAATCAGAAGTGGTCATGTACCTGGCAGCAAATGCATTCCTTTCCCCAGGTACAATATCAATATTAAAAATTATACAATCTTATCTCAATTCTGATCCTGTGATTTTAGATAGTTCACAAGCATTGTTACCAGCAGACGAGCTTAAGAAGCGATTTGAACAAGAAGGTATCTCTTTGGAAAAGCCGGTTGTGACTTCGTGTGGAACTGGAGTAACTGCATGCATTCTTGCATTGGGTCTTCATCGTCTTGGAAAGACCGATGTTCCGGTTTATGATGGATCGTGGACTTGA 342 0.4211 MLDQIPSLTELQQSPERESEVVMYLAANAFLSPGTISILKIIQSYLNSDPVILDSSQALLPADELKKRFEQEGISLEKPVVTSCGTGVTACILALGLHRLGKTDVPVYDGSWT 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08759 113 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 53 113 IPR036873 -
Vifa1g08759 113 ProSiteProfiles Rhodanese domain profile. 60 112 IPR001763 -
Vifa1g08759 113 PANTHER THIOSULFATE SULFERTANSFERASE 51 113 IPR045078 GO:0016783
Vifa1g08759 113 Gene3D - 14 113 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08759 Vifa-Chr1 1383732894 1383733678 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08759 50 113 Sulfurtransferasese or Rhodanese AT1G79230 76.562 4.14e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08759 K01011 - csv:101220393 121.324