Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08742 ATGGAAGCTGATCGAATTCATCAACTACAGAATAAAGGACTAATTGATTGCTACTGGAACCGTGTGGATAATCCTGGTACCATATGGAACTCAGAAAATGTATTATCACATTACCTTCCAAATCTAGTCCTGCAAATATTACTCGTTGTTTCCGCAACTCGTTTAATCTTTTGGATCCTTAGACCCTTACATCAACCTCATTTTGTTGCTGAGCTTCTTGCCGGTTTCGTGCTAAATATATATGTTCCCATACTGAATTCCACACTGCTTGGAATAGCACTTCCTATAAAGGGACTCCTTGCTTTTGAGTCTATAGCACAATTGGGTATCATCTACTATGTGTTTGTAACTGGTTTAGAGATGAACTTAGAAACAGTATCAAGAGCAGGAAAAAAAGCATCAACTATTGCTATTGCTGGAACATTAATTCCAATGATATTAGGGTTTGTGATATATGTTTTAGTTGCAAAAACATTCGTAAAAAACGGCGAATTCAACACTGTTTCAGCTTATTTCTTATGGTCGTTAACTATTAGTATGACAAGTTTTCCTATGGTGGCACACATTCTTTCAGACCTTAAGATTCTCTATACAGGACTTGGTAGAGTCGCATTAACAGCGGCTACAATCAACGACTTTATCAATTGGGCAATGTTTATATTTCTTATACCGTTAATTGTTAACGGTATAAGAGGAATATTATCGGTGATATCAACCATATTTTTCGTTCTTTTTTGTCGTTGTGTATTAAGTCCTCCGCTCAACAAAATATTAATCAAGAAAACGAATCAAAACGAATGGGACTTGTATCAATTATCCTATGTGATAATTGGTGTTTTTACATGTGCAACTGTTACTGAATTTCTTGGTACACATTCTGTTGTTGGAGCATTGGTTTTCGGGTTGATTCTTCCGCGTGGAAAGTTTGCAGAAATGTTGATAGAGCAATCGGAAGATATTGGATCTGGATACTTAGCCCCGTTGTTTTTCGCAAATATTGGTGTAAGAACTGAAGTGCTTCCAGTTTTAAAGGGAAACTTTATTTTGGTTATTTTTATCATGATAGTGTTGATTTCAACTAAGATTTTGAGTACTATAGTTGCTACTCGTTTCTACGGAATGCCGATTCGTGATAGTATGGCTCTTGGAATGCTTATGAATACTAAAGGGGTCTTGTCATTGATTATACTCAACATTGGATGGGATAGAAAGGTTATTAGCAAAGAAGCATTTACAATTATGGTTTTCAGCATATTTTTTATGACAGTTATAGTGGCACCTATTATCAATGCAATGTACAGACCAAGAGTAACATATGAACAAAACAAGTTAAGGACAATAGAGAATTTGAAAAGTGACTCTGAGATTAGAATTATGGCTTGTGTACACAATGCTCGCCAAGCAAATGGAATGGTCAATATCCTTGAAGCTTGTAATGGCGTAAATGTTTCACATGTACGCGTCTTTGCGCTTCAACTTGTTGAACTCAAAGGACGTGCGGCTGCACTTCTGGTTGCGCAATTAGACCAACAACAACAAAAGGAATCACATATCCTTGATCAATCGTCGGAGACGAATAATTACTCGTCCAACCATATTACCAATGTTTTTGAAGAATATTCGTCTAATAATGCTAACACTGTTGTGGAAAATCTTGTTGCTATGTCTTCTTATTCGACGATTCATAAAGACATATATAATTTAGCGTTGGAGAAACAAGCTTCGTTGATTTTACTTCCTTTTCATAAGCAAAGCACTGTGGAAGGTTCTTTAGAGATAACTGAGGCAGCAGTTAAAGACATTAACCGAAACTTGATGCAAGACGTGCCTTGTTCGGTTGGAATTTTCGTTGATCGTGGCCATCACGCTTCGTTGTTCAAGATTAAAATGCGTATTACTATGATTTTCATTGGTGGACCTGACGACCGAGAAGCCTTAGCGATTGCTTGGAGAATGTCAAAGCATCCGTGGACACGGCTTACCGTGGTGAGGATATTTTTATGTGGTAAGGCAGCCGAAGTTAATTCGTCGGGGTATGATGAAGGACAAGGACTATTAGCTGCGATTTTAGATTCGGGAAAGCAAAAAGAGTTGGATGAAGGATACCTAGGTTCGTTTCGACTTAAAGCGGTTAACAATGAAGATAGTATAACTTATGCTGAAAGAGAAGTGTATGCAGGTGAAGATATTCCTGAATTGCTTAATGAATTGGATAGAGTAGGTTGTGATTTATACATTTTAGGACATGGAAAAGGAAGAACCTCTTTGGTTTTGTTGAATTTGTTGGAATGGGCTGATTGTCTTGAGCTTGGTGTTATTGGTGATATGTTGGCATCAGATAGTTTTGGTTCAAACTCTTCAATACTTGTTGTACAACAATATGGATTTGGAGGTGTAGAATTCAATACTAATCATAGTTCTCACAAAGCACATTCAAACAATGATGATCTTGAGTCATTTTCCCAAAGGTAG 2472 0.3706 MEADRIHQLQNKGLIDCYWNRVDNPGTIWNSENVLSHYLPNLVLQILLVVSATRLIFWILRPLHQPHFVAELLAGFVLNIYVPILNSTLLGIALPIKGLLAFESIAQLGIIYYVFVTGLEMNLETVSRAGKKASTIAIAGTLIPMILGFVIYVLVAKTFVKNGEFNTVSAYFLWSLTISMTSFPMVAHILSDLKILYTGLGRVALTAATINDFINWAMFIFLIPLIVNGIRGILSVISTIFFVLFCRCVLSPPLNKILIKKTNQNEWDLYQLSYVIIGVFTCATVTEFLGTHSVVGALVFGLILPRGKFAEMLIEQSEDIGSGYLAPLFFANIGVRTEVLPVLKGNFILVIFIMIVLISTKILSTIVATRFYGMPIRDSMALGMLMNTKGVLSLIILNIGWDRKVISKEAFTIMVFSIFFMTVIVAPIINAMYRPRVTYEQNKLRTIENLKSDSEIRIMACVHNARQANGMVNILEACNGVNVSHVRVFALQLVELKGRAAALLVAQLDQQQQKESHILDQSSETNNYSSNHITNVFEEYSSNNANTVVENLVAMSSYSTIHKDIYNLALEKQASLILLPFHKQSTVEGSLEITEAAVKDINRNLMQDVPCSVGIFVDRGHHASLFKIKMRITMIFIGGPDDREALAIAWRMSKHPWTRLTVVRIFLCGKAAEVNSSGYDEGQGLLAAILDSGKQKELDEGYLGSFRLKAVNNEDSITYAEREVYAGEDIPELLNELDRVGCDLYILGHGKGRTSLVLLNLLEWADCLELGVIGDMLASDSFGSNSSILVVQQYGFGGVEFNTNHSSHKAHSNNDDLESFSQR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08742 823 Gene3D - 40 441 IPR038770 -
Vifa1g08742 823 PANTHER CATION/H + ANTIPORTER 14 794 - -
Vifa1g08742 823 Pfam Sodium/hydrogen exchanger family 48 428 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08742 Vifa-Chr1 1380998926 1381001663 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08742 15 814 Antiporter Super Family AT2G13620 35.926 1.73e-171 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08742 - - mtr:11442852 1164.83