Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08691 ATGGCTGAACCAGAAGCGAACAACGAAGATGATGACTACATGGGTGACCTTTCTAGGTTTCTTCCTTCTGATTCTATTCAGCCTCCAAATCCAAACACTAGTTCAAAAAGGATTTCTGACAACAAAGGTCCTTCAATAAACTCTTCCAAGAGCCAGTTGAAAGCATTAAACTGGCAAGAACGGCGGAAAATTGAAAGAGAAAGGAAGCAAATACGAGAGGATGAACAAACATTAGCAAAAGTGGAAGCTCCAATACCACAATCCAACATTGGGTTTAAGCTTCTCCAAAACATGGGTTATACTCCAGGTTCTGCCCTTGGCAAGGAGGGCTCGGGACGGGCTGAACCGGTAGGGATTGAAATTCGACGGTCACGAGCTGGTATAGGCTTAGAGGATCCTCATAAGGAAAAAAAGAAAAGGGAGGAAATCACAATCCACAGGAAAAGGAGGAATGACGAGGCTCTGATGGAAGAATTTGGGTCTAGGCAGAAATCGCGGTGGAAGAAATCGGGAATTGAGGAGCCGCCTAAGAATGAGGATGATGCCGAGGGTGAAGATGAAGAAGAGGAAGAAGAAGAAATAACAGAAGAGGACTTGCTTGATGTTTTGATGAAACTGAGGGATGAGTTCAATTACTGCCTCTTCTGCGGATGTAAATATGAATCAAGTTCTACCCTCTTGGATAACTGCCCTGGAATCAACGAAGATGATCACTAA 717 0.4393 MAEPEANNEDDDYMGDLSRFLPSDSIQPPNPNTSSKRISDNKGPSINSSKSQLKALNWQERRKIERERKQIREDEQTLAKVEAPIPQSNIGFKLLQNMGYTPGSALGKEGSGRAEPVGIEIRRSRAGIGLEDPHKEKKKREEITIHRKRRNDEALMEEFGSRQKSRWKKSGIEEPPKNEDDAEGEDEEEEEEEITEEDLLDVLMKLRDEFNYCLFCGCKYESSSTLLDNCPGINEDDH 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08691 238 Pfam G-patch domain 87 130 IPR000467 GO:0003676
Vifa1g08691 238 SMART DUF4187_2 184 238 IPR025239 -
Vifa1g08691 238 MobiDBLite consensus disorder prediction 124 197 - -
Vifa1g08691 238 MobiDBLite consensus disorder prediction 178 197 - -
Vifa1g08691 238 MobiDBLite consensus disorder prediction 23 55 - -
Vifa1g08691 238 ProSiteProfiles G-patch domain profile. 87 133 IPR000467 GO:0003676
Vifa1g08691 238 MobiDBLite consensus disorder prediction 124 177 - -
Vifa1g08691 238 SMART G-patch_5 85 131 IPR000467 GO:0003676
Vifa1g08691 238 MobiDBLite consensus disorder prediction 1 61 - -
Vifa1g08691 238 PANTHER UNCHARACTERIZED 178 238 IPR039249 -
Vifa1g08691 238 Pfam Domain of unknown function (DUF4187) 185 238 IPR025239 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08691 79 129 C2H2 Transcription Factor Family AT5G26610 45.098 4.75e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08691 - - tpra:123896801 365.155