Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08688 ATGGAGCGGTTTGAAGGTTTCCTTCTTGGTGAAAATCGTGGCACAATGGTTGTAGGTTTGTTGTTAAGGTTATATGTAGTGGTTTACTGTTGTGGAAAAGATGATGGTAAGCTATGGCAAAAGATGATGGATTGTTCTGCATTGCTCAACTTCAAACTTGGCATGGACAATCCTTCTTCCAGCCAGCTTCCTGCAGTTCTGAAACCCTTGTTGGAAACCATTTGTAGTATAGCCGCTCATCTTCGTTTCTCACAGCATCCCGTGAAGTCGCTCAAAAATGGTTACAGACTAAGAGAACCAAGAAGGTCGGTATTGTTGGCAAATACGGCACCCGATATGCACAGTAAATTCATCTACGAGTTTTGTGGAAAGTATGCTGTTAAGAGAAAGGTTGTTGGTATTTGGGGCTGCAAAGATTGTGGGAAGGTCAAGGCTGGTGGTGCTTACACTTTGAATACTGCCAGTGTTGTGACTGTTCGGAGTACCATCCGAAGGTTGAGGGAGCAGACTGAGAGTTAG 519 0.4412 MERFEGFLLGENRGTMVVGLLLRLYVVVYCCGKDDGKLWQKMMDCSALLNFKLGMDNPSSSQLPAVLKPLLETICSIAAHLRFSQHPVKSLKNGYRLREPRRSVLLANTAPDMHSKFIYEFCGKYAVKRKVVGIWGCKDCGKVKAGGAYTLNTASVVTVRSTIRRLREQTES 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08688 172 Gene3D - 101 172 IPR011331 GO:0003735|GO:0005840|GO:0006412
Vifa1g08688 172 PANTHER 60S RIBOSOMAL PROTEIN L37A-2 113 172 - -
Vifa1g08688 172 Pfam Ribosomal L37ae protein family 109 168 IPR002674 GO:0003735|GO:0005840|GO:0006412
Vifa1g08688 172 SUPERFAMILY Zn-binding ribosomal proteins 108 162 IPR011332 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08688 Vifa-Chr1 1371158957 1371163761 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08688 112 172 Cytoplasmic Ribosomal Protein Gene Family AT3G10950 85.246 9.97e-34 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08688 K02921 - mnt:21406141 117.087