Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08669 ATGTCTCCTATGTCAACTTTTCCAATTCAAAAATCTGAATTTCGTATCTTACTTTTCAATGGATCTGTAAAACCTTGCAAATGCGCTAAAATTACCAATTCATGGACCATGTCTATGGATTCGAGATTTTCGTCAACTGTGAATGGTAATAGTGATATGAAAAATAATAAGAAGAAGAAGGAAGAACTCTCTGTTTCGATGGAGGTTTCAATCTCATCTATTCCTAAAGTGGAAGAAGGAACTTTAAGGTCTGATGGTCTTCGATTCGATCGGTTGCAGCCGTCGGATTATGAATTGGTTCGAGAAAGAAGGTTTGAGTTTGGGCAGTTTGTAGCTAGAGATGCTGTGCTTGATGAAGAGTATTGGACAGCAGCCTGGCTAAGGGCAGAAAGTCATTGGGAGAATCGAACATATGAAAGATATGTTGATATCTACAAAAGGAAATTTGCCGAGCAGGAATTTAATGCGGTAAAAAGGCGGTGCAAGGTTCAAAATGGGGATAGCTGCGCTTGCATTATCGCGGTGAGGAAGGAGCAGAAGAATGTAAAGCGCTCGATAATAAAAAGTGTGGTAGGAACACTTGATTTGAATATCCGGTATTTGCTGCAAGGAGAGACTTTTCCCGGGGAACGAGTTAAGACACCCTTTTCTTGCAGCACAAACAGGACACCACCAAGTAGATATGGTTACATTGCTAACTTATGTGTAACCAAATCGGCTCGCCGACAAGGAATCGCAAGCAACATGATGTATTTTGCTGTTGAATCTGCAAAATCTAACGGCGTGAGGCAAGTATACGTGCATGTTGACAGAAATAACATGCCTGCACAATTATTGTACCAAAAGATGGGCTTTGAGATGGTTGAAACAGCCAATTCCCGGTTGTTATTAGAGAAAACATACTTGCTACGGTTACTGATGTAA 924 0.4069 MSPMSTFPIQKSEFRILLFNGSVKPCKCAKITNSWTMSMDSRFSSTVNGNSDMKNNKKKKEELSVSMEVSISSIPKVEEGTLRSDGLRFDRLQPSDYELVRERRFEFGQFVARDAVLDEEYWTAAWLRAESHWENRTYERYVDIYKRKFAEQEFNAVKRRCKVQNGDSCACIIAVRKEQKNVKRSIIKSVVGTLDLNIRYLLQGETFPGERVKTPFSCSTNRTPPSRYGYIANLCVTKSARRQGIASNMMYFAVESAKSNGVRQVYVHVDRNNMPAQLLYQKMGFEMVETANSRLLLEKTYLLRLLM 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08669 307 Pfam Acetyltransferase (GNAT) family 141 285 IPR000182 GO:0016747
Vifa1g08669 307 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 305 - -
Vifa1g08669 307 Gene3D - 120 300 - -
Vifa1g08669 307 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 223 307 IPR000182 GO:0016747
Vifa1g08669 307 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 165 290 IPR016181 -
Vifa1g08669 307 CDD NAT_SF 216 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08669 Vifa-Chr1 1368144530 1368146857 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vifa1g08669 Acetyltransf_1 2.3e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08669 - - mtr:25486506 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g08669 1 1368144530 1368146857 Vifa1g08669 1 1368144530 1368146857 ECH