Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08668 ATGTCTCCTATGTCAACTTTTCCAATTCAAAAATCTGAATTTCGTATCTTACTTTTCAATGGATCTGTAAAACCTTGCAAATGCGCTAAAATTACCAATTCATGGACCATGTCTATGGATTCGAGATTTTCGTCAACTGTGAATGGTAATAGTGATATGAAAAATAATAAGAAGAAGAAGGAAGAACTCTCTGTTTCGATGGAGGTTTCAATCTCATCTATTCCTAAAGTGGAAGAAGGAACTTTAAGGTCTGATGGTCTTCGATTCGATCGGTTGCAGCCGTCGGATTATGAATTGGTTCGAGAAAGAAGGTTTGAGTTTGGGCAGTTTGTAGCTAGAGATGCTGTGCTTGATGAAGAGTATTGGACAGCAGCCTGGCTAAGGGCAGAAAGTCATTGGGAGAATCGAACATATGAAAGATATGTTGATATCTACAAAAGGAAATTTGCCGAGCAGGAATTTAATGCGGTAAAAAGGCGGTGCAAGGTTCAAAATGGGGATAGCTGCGCTTGCATTATCGCGGTGAGGAAGGAGCAGAAGAATGTAAAGCGCTCGATAATAAAAAGTGTGGTAGGAACACTTGATTTGAATATCCGGTATTTGCTGCAAGGAGAGACTTTTCCCGGGGAACGAGTTAAGACACCCTTTTCTTGCAGCACAAACAGGACACCACCAAGTAGATATGGTTACATTGCTAACTTATGTGTAACCAAATCGGCTCGCCGACAAGGAATCGCAAGCAACATGATGTATTTTGCTGTTGAATCTGCAAAATCTAACGCAGGCGTGAGGCAAGTATACGTGCATGTTGACAGAAATAACATGCCTGCACAATTATTGTACCAAAAGATGGGCTTTGAGATGGTTGAAACAGCCAATTCCCGGTTGTTATTAGAGAAAACATACTTGCTACGGTTACTGATGTAA 927 0.4078 MSPMSTFPIQKSEFRILLFNGSVKPCKCAKITNSWTMSMDSRFSSTVNGNSDMKNNKKKKEELSVSMEVSISSIPKVEEGTLRSDGLRFDRLQPSDYELVRERRFEFGQFVARDAVLDEEYWTAAWLRAESHWENRTYERYVDIYKRKFAEQEFNAVKRRCKVQNGDSCACIIAVRKEQKNVKRSIIKSVVGTLDLNIRYLLQGETFPGERVKTPFSCSTNRTPPSRYGYIANLCVTKSARRQGIASNMMYFAVESAKSNAGVRQVYVHVDRNNMPAQLLYQKMGFEMVETANSRLLLEKTYLLRLLM 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08668 308 CDD NAT_SF 216 269 - -
Vifa1g08668 308 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 223 308 IPR000182 GO:0016747
Vifa1g08668 308 Gene3D - 120 301 - -
Vifa1g08668 308 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 306 - -
Vifa1g08668 308 Pfam Acetyltransferase (GNAT) family 141 286 IPR000182 GO:0016747
Vifa1g08668 308 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 140 293 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08668 Vifa-Chr1 1368144530 1368146857 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vifa1g08668 Acetyltransf_1 5.1e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08668 - - mtr:25486506 470.7