Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08653 ATGGGTTCTGTTTCCATCACCATTTTCTGTTTCGTTCTCATCACCCTCTTTTCACAATGCCAATCCTCACCGTCCAAAAAAACCTTCATTGTTCACATGAAGGACCACGATAAGCCTACCATATACCAAACCCATTACGATTGGTTTTCCTCAACTCTCCAATCTCTTACCATTTCCACCGATTCCGCTAATACCGATACTGATACCGACTCATTCGACTCCGATCCGCTTCTCTACTCTTACACAACCGCTTACAACGGTTTCGCCGCCACATTAAACGACCAACAAGCCAAAACACTCCTCCAAAACGACGCTGTTTTGGGAGTGTACGAAGATACTCTCTACCATCTTCACACTACACGGACTCCACAGTTTCTTGGCCTCGAATCGGAGACTGGTTTATGGGAAGGACACAGAACGCAGGAGTTAGATCAAGCGTCACATGATGTTATCGTAGGGGTGCTCGACACTGGAGTGTGGCCGGAATCTCCAAGTTTTAATGACGCTGGTTTGCCTCAGATTCCCACGCGCTGGCTTGGCGCGTGTGAGAATGCGCCTGATTTTAACGCGACGAACTGTAACAGAAAACTCATCGGTGCAAGAAGCTTCTCTAAAGGCTTTCACATGGCTTCCGGTTCCGGTTACGGAAAGGGATCTAAAGATAAAGAGATTGTTTCACCTCGTGACACAGACGGCCATGGGACTCATACTGCTAGCACCGCCGCTGGCTCTCACGTCGGGAACGCGAGTTTTCTCGGTTACGCTGCCGGGACTGCGAGAGGCATGGCTCCGCAAGCGCGTGTTGCGGTTTACAAAGTTTGTTGGACCGACGGTTGTTTTGCTTCCGACATTCTCGCTGGAATGGATCGTGCGATTCAAGACGGTGTTGACGTGCTTTCTCTCTCACTCGGCGGTGGATCTGCTCCTTATTTTCACGACACGATCGCTATCGGAGCTTTCGCGGCGGTGGGGCGTGGGATATTCGTTTCGGCCTCCGCCGGTAATAGTGGTCCCACCAGGGCTTCACTTGCCAACGTGGCACCGTGGATTATGACCGTTGGAGCGGGGACGTTAGACCGGGATTTTCCTGCTTACGCAACGCTTGGTAATAAAAAACAGTTTTCAGGAGTTTCTCTTTACAGTGGAAAAGGAATGGGAAAGAAACCGGTTGGTTTGGTTTATTTCAAGGGTTCCAATTCGAACCAGTCCGCGAGCATTTGTATGGCCGGTTCACTCGACCCGGCTTTGGTTCATGGGAAAGTGGTTATGTGCGATAGAGGAATCAACGCGCGCGTGGAGAAAGGTAAAGTTGTGAAAGAAGCTGGTGGAATTGGGATGATACTAGCGAACACCGAAGCGAGTGGGGAAGAGTTAGTGGCGGATAGTCACCTGCTACCAGCTGTGGCGGTGGGGAGAGTGATTGGCGACGAGATCAGAGAGTATGTGGCTTCTAATGCTAATCCAACGGCTGTGCTTAGTTTTGGTGGAACTCTTTTGAACGTTAGGCCTTCACCTGTGGTGGCAGCGTTTAGTTCTAGGGGGCCCAATATGGTAACAAAAGAGATTTTGAAGCCTGATGTTATTGGGCCTGGCGTGAACATTTTGGCTGGATGGTCGGAGGCTATTGGGCCCTCTGGGTTGCCGGAGGATAGTCGCAAAACACAGTTCAACATTATGTCAGGGACTTCAATGTCTTGTCCACACATAAGTGGATTGGCTGCATTGTTGAAAGCAGCTCATCCAAATTGGAGTCCAAGTGCAATTAAATCAGCACTTATGACAACAGCTTATACACATGACAATACCAAGTTCCCACTTCGTGATGCTGCTGGAAAAGGCTTTTCAACTCCATGGGCTCACGGTGCTGGCCATGTCAACCCACAAAAAGCACTTTCTCCCGGCCTTGTTTATGATGCCTCAACAAAAGATTACATTACCTTCTTGTGCTCTTTAAACTACAACCCGGAGCAAATCCAACTCGTTGTTCAGCAACGCGGTGTCAATTGTACCAAGAAATTCTCTGATCCCGGTCAGTTGAATTACCCTTCTTTCTCAGCAGTGTTTTCTAGTAAGAGGATTGTGAGATATACCCGCATTTTGACTAATGTTGGCGAGGCGGGTTCTGTCTATAATGTTGTGGTTGACGGGCCACCTACCGTGGGGATAGTGGTGAGACCTTCTAGGCTTGTGTTTGAGAAAGTAGGGGATAGAAAAAGGTACACTGTGACTTTTGTGTCTAAGAAGGGTCCTAATGCTTCTTCAGTTAGGAATGGATTTGGTAGCATTCTATGGAGCAATGCACAGCACCAAGTTAGGAGTCCAGTTGCTTTTGCTTGGACAAGTTTGTGA 2349 0.4866 MGSVSITIFCFVLITLFSQCQSSPSKKTFIVHMKDHDKPTIYQTHYDWFSSTLQSLTISTDSANTDTDTDSFDSDPLLYSYTTAYNGFAATLNDQQAKTLLQNDAVLGVYEDTLYHLHTTRTPQFLGLESETGLWEGHRTQELDQASHDVIVGVLDTGVWPESPSFNDAGLPQIPTRWLGACENAPDFNATNCNRKLIGARSFSKGFHMASGSGYGKGSKDKEIVSPRDTDGHGTHTASTAAGSHVGNASFLGYAAGTARGMAPQARVAVYKVCWTDGCFASDILAGMDRAIQDGVDVLSLSLGGGSAPYFHDTIAIGAFAAVGRGIFVSASAGNSGPTRASLANVAPWIMTVGAGTLDRDFPAYATLGNKKQFSGVSLYSGKGMGKKPVGLVYFKGSNSNQSASICMAGSLDPALVHGKVVMCDRGINARVEKGKVVKEAGGIGMILANTEASGEELVADSHLLPAVAVGRVIGDEIREYVASNANPTAVLSFGGTLLNVRPSPVVAAFSSRGPNMVTKEILKPDVIGPGVNILAGWSEAIGPSGLPEDSRKTQFNIMSGTSMSCPHISGLAALLKAAHPNWSPSAIKSALMTTAYTHDNTKFPLRDAAGKGFSTPWAHGAGHVNPQKALSPGLVYDASTKDYITFLCSLNYNPEQIQLVVQQRGVNCTKKFSDPGQLNYPSFSAVFSSKRIVRYTRILTNVGEAGSVYNVVVDGPPTVGIVVRPSRLVFEKVGDRKRYTVTFVSKKGPNASSVRNGFGSILWSNAQHQVRSPVAFAWTSL 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08653 782 Pfam Fibronectin type-III domain 678 776 IPR041469 -
Vifa1g08653 782 Pfam Peptidase inhibitor I9 28 118 IPR010259 -
Vifa1g08653 782 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 118 IPR037045 -
Vifa1g08653 782 SUPERFAMILY Protease propeptides/inhibitors 27 117 - -
Vifa1g08653 782 Pfam Subtilase family 148 599 IPR000209 GO:0006508|GO:0008236
Vifa1g08653 782 Gene3D - 359 499 - -
Vifa1g08653 782 MobiDBLite consensus disorder prediction 213 241 - -
Vifa1g08653 782 Gene3D Peptidase S8/S53 domain 149 644 IPR036852 GO:0004252|GO:0006508
Vifa1g08653 782 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Vifa1g08653 782 PRINTS Subtilisin serine protease family (S8) signature 560 576 IPR015500 -
Vifa1g08653 782 PRINTS Subtilisin serine protease family (S8) signature 229 242 IPR015500 -
Vifa1g08653 782 FunFam subtilisin-like protease SBT1.5 359 499 - -
Vifa1g08653 782 FunFam Subtilisin-like protease SBT1.5 648 780 - -
Vifa1g08653 782 Gene3D - 648 779 - -
Vifa1g08653 782 Pfam PA domain 407 478 IPR003137 -
Vifa1g08653 782 ProSiteProfiles Serine proteases, subtilase domain profile. 131 631 - -
Vifa1g08653 782 ProSitePatterns Serine proteases, subtilase family, serine active site. 561 571 IPR023828 -
Vifa1g08653 782 SUPERFAMILY Subtilisin-like 117 635 IPR036852 GO:0004252|GO:0006508
Vifa1g08653 782 CDD Peptidases_S8_3 115 597 IPR034197 -
Vifa1g08653 782 CDD PA_subtilisin_like 365 490 - -
Vifa1g08653 782 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 776 IPR045051 -
Vifa1g08653 782 FunFam Subtilisin-like protease SBT1.5 149 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08653 Vifa-Chr1 1365358512 1365361080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08653 9 779 Subtilisin-like Serine Gene Family AT2G05920 65.544 0.0 1023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08653 - - gmx:100797543 1182.16