Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08617 ATGCCAACAAACTCCGCCGCTTTTTTTCGGTCATCAACCGGAAACACTCCGCCGCATTTTTTCCTTCACCAAACTCCACCATATGGTCAACCATCTATGGAATTTTTTCGTCATGAACCGGAAACATCGATTGTGTCTATGTCCGAAAGTCAAGTTCCACCATTTTCAACTCAAGTCGGTATTGAAAATGAAGAAAGTCGCCATGTTAAAAAAAAAGCTCGAGATGTATTTTCAAGGGATGAAGATATACTTCTTATCCAATCATGGCTCAATGTTTCAAAGGATTCAATTGTGGGAGTTGATCAAAAAGCTGAGAGTTTTTGGTTAAGAATCACTACCAATTATAACGAGTATCGTGGACAATCGCGGGAAAAGCTACGTGGGCAATTAAAATCTCGATGGCATCGAATAAATGGCTTGGTTCAAAATTTTGTTGGGTGTTACAAACAAGCTGTTAATGGAAAGAAAAGTGGGACTTCGGAGAAAGATATCTTGGTTGCTGCATATGCATTTTTTGCTCAAGATGAAGGTACACCATTCAATCTTGAGTACGCATGGCGATTGTTAAAGGATGAACCTAAATGGATGGGAGCATCGACCGAAAATTCTTCAAAAAGAACAAAGAATTCTACTAGTGGGGCACACTCATCATCGTCTAACCTCGCGACACCTTCAAGTTATGAGTTTAACTCATCATCACCAATGGAGCGTCCAATGGGACAACAAGCAGCAAAAAGAAAGAGTAAGGCAAAGGAAAATGCATCTGAATCACCTTCTAATGTTGTGCATGAAACATGGAATAAAAGAGCAGCGGCAATGAAAAGACTAGCTCAATGTAAGGAGGACGAGATGGAGTATAAGGCAATGCAATTACTCTCGAAATACACTTCTATGATGAATGCTAGTCAACGAGATATTCATAAAAAATATTGTAATAAGTTGGAAAAAAAATATGGATTTTAG 963 0.3884 MPTNSAAFFRSSTGNTPPHFFLHQTPPYGQPSMEFFRHEPETSIVSMSESQVPPFSTQVGIENEESRHVKKKARDVFSRDEDILLIQSWLNVSKDSIVGVDQKAESFWLRITTNYNEYRGQSREKLRGQLKSRWHRINGLVQNFVGCYKQAVNGKKSGTSEKDILVAAYAFFAQDEGTPFNLEYAWRLLKDEPKWMGASTENSSKRTKNSTSGAHSSSSNLATPSSYEFNSSSPMERPMGQQAAKRKSKAKENASESPSNVVHETWNKRAAAMKRLAQCKEDEMEYKAMQLLSKYTSMMNASQRDIHKKYCNKLEKKYGF 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08617 320 PANTHER - 62 317 - -
Vifa1g08617 320 MobiDBLite consensus disorder prediction 197 238 - -
Vifa1g08617 320 Pfam No apical meristem-associated C-terminal domain 179 306 IPR029466 -
Vifa1g08617 320 MobiDBLite consensus disorder prediction 197 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08617 Vifa-Chr1 1359023692 1359024654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08617 70 249 Glutathione S-transferase Gene Family AT5G41240 37.368 6.95e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08617 - - cam:101493921 375.555