Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08596 ATGAAATCATATATATATATACGTCTCAACGTTGCCGACGCAATTTGGGAAGGTGGTTCCAATGCGCCTTTCACCGCCGCTCAGATCCTCGCGCGTGTAGTTCCAACCGGTGGCGGCGACGCCGAGAATCTTCAATGCTTGCTATGCATTCTCGCTAGCTACTGCGTGCTTGAAGAGGTTATTGTTGGCGGTGAAAGGAAGTACTCACTAACAGATGTTGGGAAAACTCTTGTGACCGATGAACAAGGCTTATCAGATGGTGCTTACCTGCTCCAACACCACCAGGATGCGTTAATGAGAGTATGGCCATTAGTACACGAATCAGTTGTGAACCCTACAAAAGAGTTATTTGAAATGGTTAATGGAGAAAGACCATATGAGTTAATGAAGGCACTTTTGGGGAGTTACAATGAGTTAATGATTTGCTCATTGTTATTGCTGGAAATGTTGAGAGTGCTCCAACTATGTGATGAATCAACTCATTTTCATGGTTTCTCTTTTTTAATCCAATGTTGA 516 0.4322 MKSYIYIRLNVADAIWEGGSNAPFTAAQILARVVPTGGGDAENLQCLLCILASYCVLEEVIVGGERKYSLTDVGKTLVTDEQGLSDGAYLLQHHQDALMRVWPLVHESVVNPTKELFEMVNGERPYELMKALLGSYNELMICSLLLLEMLRVLQLCDESTHFHGFSFLIQC 171
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08596 171 Gene3D - 2 114 IPR036388 -
Vifa1g08596 171 SUPERFAMILY "Winged helix" DNA-binding domain 7 80 IPR036390 -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08596 7 126 Monolignol Biosynthesis Gene Families AT3G53140 60.800 9.48e-44 146
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08596 - - gmx:100784957 175.637