Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08585 ATGGGTAAGGGAAGAGGCAGCGCAAGCAGCTCAAGTGTTACTACAATTCTACTATTATGTATGTTTCTGTTTCATCCTAATATGATTCATGCAGAAACATACATTGTTGGTGATGGCCAAGGCTGGACTTTTGGTGTTCAAAACTGGCCTTCAGGAAAAAGTTTCAATGGAGGTGACATACTTGTATTCAATTACATCCCTTTGATACACAATGTGGTGAAAGTGAACGAGTTTGGCTATAATTCATGTGTGGCTCTTGGAGGATCTGAGTTGCATGTATCTGGATCAGATAGAATTACACTTGCTAAAGGAGCCAACTATTATATATGTGCTGTTCCTGGTCATTGTAACCGAGGACAGAAAATTGCAGTCAATGCTAATTAA 384 0.3932 MGKGRGSASSSSVTTILLLCMFLFHPNMIHAETYIVGDGQGWTFGVQNWPSGKSFNGGDILVFNYIPLIHNVVKVNEFGYNSCVALGGSELHVSGSDRITLAKGANYYICAVPGHCNRGQKIAVNAN 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08585 127 ProSiteProfiles Phytocyanin domain profile. 32 127 IPR003245 GO:0009055
Vifa1g08585 127 SUPERFAMILY Cupredoxins 33 126 IPR008972 -
Vifa1g08585 127 FunFam basic blue protein-like 32 126 - -
Vifa1g08585 127 PANTHER BLUE COPPER PROTEIN 30 125 IPR039391 GO:0009055
Vifa1g08585 127 CDD Plantacyanin 33 126 IPR041844 -
Vifa1g08585 127 Pfam Plastocyanin-like domain 43 120 IPR003245 GO:0009055
Vifa1g08585 127 Gene3D - 30 127 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08585 Vifa-Chr1 1353051067 1353051580 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08585 1 126 Phytocyanin Superfamily AT1G17800 36.029 2.30e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08585 - - psat:127106281 180.644