Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08516 ATGTGGGTTGCTATCAGATGCAACGTGATTCAAGCTGTGTATTTGAGCCTTTCTGGTTGTGAAGAATTACTTGAAGTTCAGGCTTCTGCTTTTTCTAAGGACACACTTGTTACTTTGCTACTGGATGGGTGCAAAAAAGTGCCAAGTCTTATGGGTGAGAAGCATTTAAAATCTCTAGCAATCTTCAGTGTCAAAGGTTGCTATGGTCTGAAGGAATTTTCATTATCTTCGGATGCACTAAGAAGGTTGGATTTGAGCAATACAGGAATCGAAATATTGCATCCATCAATTGGTGGTATGACCAACCTTTATTCGTTAAATCTAGAAGGTTTAAATCTAACAAGTCTACCGATTGAATTGTCTTACTTGGCACTTACTGAACTTCGGGTTTCTAAGTGCAGTGTAGTAACCAAATCAAAGTTAAAAGCCCTATTTGATGGTCTGAGCTCACTAAGATTACTACACTTGAAAGACTGTAGTAACTTGTTTGAACTCCCTGCAAACATTAGTTCTTTATCATCATTGCAAGAGTTAAGACTAGATGGAAGCAATGTGAAGGAGTTGCCTGCTAGCATCAAAGACCTCTTAGAGCTACAAGTTCAGTCTTTAGACAATTGCAGTAAGCTTCAATGTCTGCCAGAACTGCCTTTAAGCATCAAAGAGTTTCAGGCTGGCAACTGCTTGTCGTTAACGACTGTATCCACTTTGAAGACTTTTTCAGTAAACATGATTGGACAGAACAAATACATTTCGATAACGAATAGCATTAAGATGAAACTGGATGGACCCTCCCTTGCCTGCATGACGGAAGATGCCGTGTTAACAATGAAAAGTGCTGCCTTTCACAATGTATTAGTGAGAAAGTACAGATTCCAAACCCACTGCTACAATTATAACAGCGCCGAGGTATGTCTGCCAGGACACAGAATTCCAAGTCAGTTCAAACAACGATCCACCACATACGCCTCCTTAACTATTGACGTTCTCAACTGGGTGGGCTTCATTTTAGCAGTTGTTGTTACTCCATCTAACATAACACAAGAGGGTGAATACTTTGTTGGAATCCTATGTCAGTGCTATTCAGAAGATGGAAGGACGGAAGTGGGAAATAAGTCTAAGTGGAAGCCTAAACTGGTTACAGATTTGGAAATGGATCATATTTTTGTATGGTATGATCCATTCCTTTGTGACACCATACTCAGAAGGAATGAAAGAAAGGTTTCTTTTAAATTCTATATTACAACTTATACAACTAGTGGCAGAGAACTTGGTGACCTTTTAAAAATCAAAGAGTGTGGGGTTTGTCCAATTTACTACTCAGAAAGTCAGAAGGTTTTAGGCACAGGGAATTTAGACAAGGACTTGGAAAAAGAGTTGTATCAGGAAATTGAACATGAGAGATCAGTTGAAGGCTATGATGAGGGAGAAGGCATTGATATCCAAATAGGAAACACAGACACAAGAGCTTAA 1470 0.3925 MWVAIRCNVIQAVYLSLSGCEELLEVQASAFSKDTLVTLLLDGCKKVPSLMGEKHLKSLAIFSVKGCYGLKEFSLSSDALRRLDLSNTGIEILHPSIGGMTNLYSLNLEGLNLTSLPIELSYLALTELRVSKCSVVTKSKLKALFDGLSSLRLLHLKDCSNLFELPANISSLSSLQELRLDGSNVKELPASIKDLLELQVQSLDNCSKLQCLPELPLSIKEFQAGNCLSLTTVSTLKTFSVNMIGQNKYISITNSIKMKLDGPSLACMTEDAVLTMKSAAFHNVLVRKYRFQTHCYNYNSAEVCLPGHRIPSQFKQRSTTYASLTIDVLNWVGFILAVVVTPSNITQEGEYFVGILCQCYSEDGRTEVGNKSKWKPKLVTDLEMDHIFVWYDPFLCDTILRRNERKVSFKFYITTYTTSGRELGDLLKIKECGVCPIYYSESQKVLGTGNLDKDLEKELYQEIEHERSVEGYDEGEGIDIQIGNTDTRA 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08516 489 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Vifa1g08516 489 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 125 233 - -
Vifa1g08516 489 Gene3D Ribonuclease Inhibitor 4 265 IPR032675 -
Vifa1g08516 489 SUPERFAMILY L domain-like 11 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08516 Vifa-Chr1 1343491243 1343492819 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08516 41 434 WRKY Transcription Factor Family AT5G45050 21.789 1.92e-08 55.1