Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08332 ATGAAACACTTTAGTAGAGTTGATAGGAAAAGAGATCACCAGCGTTTGACCCGCACTAAATGTCTCTCTAGGCTTTGTGTGCATTACAAAGTCGACACGAATAGATATGTAGTGCCGTTATTTGAAGAGGCTCACAACCATGAATTAACCCTATCTAGGTTTGTGCACTTACACCTTATTTATCATGAAATTTCTAAAGCAAATAGAGCTCAGATTGACAATCTTCAGTCACATGGAATTAGAACTTGTCATTTAATGAGGTACATGGTTGCTCAGAAGGGTGGATACGCCCGTGTTGGGTTTACAAAGAAGGATCTGTATAATTATTTTGATAGAAAAATGTGTGCTACTATTAAAGATGGTGACGTTGTCGCTGCTTTAAATTATCTAAATGTAAAGTCATCTGTTGATCCCATGCTATATGCTAAATATTATGTCAATAGTAATGGACGAATAAAGTCTCTTTTTTGGGCTGATGGGAGCAGTAGATCTGACTATTTTTGTTTTTGGCGATGTGGTTGCATTCGACACAAATTACAAGAAGAACAAATACAGTTACCAATTAGTTATATTTTCAGGGTGTAA 585 0.3624 MKHFSRVDRKRDHQRLTRTKCLSRLCVHYKVDTNRYVVPLFEEAHNHELTLSRFVHLHLIYHEISKANRAQIDNLQSHGIRTCHLMRYMVAQKGGYARVGFTKKDLYNYFDRKMCATIKDGDVVAALNYLNVKSSVDPMLYAKYYVNSNGRIKSLFWADGSSRSDYFCFWRCGCIRHKLQEEQIQLPISYIFRV 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08332 194 PANTHER OS01G0519700 PROTEIN 2 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08332 Vifa-Chr1 1302116419 1302117003 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vifa1g08332 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08332 - - tpra:123910027 258.455