Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08290 ATGGATCCTAATCAATTTCATTATCAACAAGCTATGTTCAATTTCATGCAAAATTATCAAAATCATAATCCTCAAAATTCTCAAATTCCATCGATGCCAACAAATCCCGCCATATTTTTTCCATCACCAAACAATCCAAATATGTATCATATACCTCAAATGAATTCTAATAGTATGGAATTTTCTACCCAAGTTCCACCATTTTCTACTCAAGTTGGTACTCAAGTCGTTAAAAAAGAATCTCGAGAGCAATTTACAAGGGATGAGGATATACTTCTTATCCAATCATGGCTCAATGTTTCAAAGGATCCAATTGTGGGAGTTGATAAAAAGGCTGAGAGTTTTTGGTTAAGAATAGCTGCCAATTATAACCAGTATCGTGGGCAATCGCGGGAAAAGTTAGGGGGGCAATTAAAATGCCGATGGCATAGAATAAATGGTTTGGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTAATGGAAAGAAAAGTGGGACATCAGATAACGATATCATGGCCTCTACACATGCTTTTTTTGCTCAGGATGAAGGTACAACATTCAATCTTGAGTACGCATGGCGATTGTTAAAAGATGAACCTAAATGGATGGGAGAATCGATTGGAAATTCTTCAAAAGTAACAAAGACTTCTGCTAGTGGGGCATCATCGGCTAACTCAGATACACCTTCAAGTTACGAGTTTAACTCATCATCACCAATGGTGCGTCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGGCAAAGGAAATTCCAAATGCAACATAA 792 0.3712 MDPNQFHYQQAMFNFMQNYQNHNPQNSQIPSMPTNPAIFFPSPNNPNMYHIPQMNSNSMEFSTQVPPFSTQVGTQVVKKESREQFTRDEDILLIQSWLNVSKDPIVGVDKKAESFWLRIAANYNQYRGQSREKLGGQLKCRWHRINGLVQKFVGCYKQAVNGKKSGTSDNDIMASTHAFFAQDEGTTFNLEYAWRLLKDEPKWMGESIGNSSKVTKTSASGASSANSDTPSSYEFNSSSPMVRPMGQKAAKRKGKAKEIPNAT 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08290 263 MobiDBLite consensus disorder prediction 208 263 - -
Vifa1g08290 263 Pfam No apical meristem-associated C-terminal domain 187 255 IPR029466 -
Vifa1g08290 263 PANTHER - 58 259 - -
Vifa1g08290 263 MobiDBLite consensus disorder prediction 208 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08290 Vifa-Chr1 1295519276 1295520067 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08290 78 255 Glutathione S-transferase Gene Family AT5G41240 33.684 5.69e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08290 - - psat:127115199 400.208