Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08266 ATGGCAAGTAGTGGCATGAATTTGGTGTTTCATCACGTATCTACAACTTCTTTAGCCAAACCCATAAGACTATGCGCAAGCTCTCATTTACTTTCTCCAACCCAGCCTGTCACAACTACCAGTAAAGCCCTCTGTCGGCGATGCAGCTGCAAATTGAAACGGCTTGCTGTAAGGAGTTGTTCTATCACTGAGTTTGTTGTTTCCAGTGATGAGAAATATGGAAATAAGCAGGTTATTAGTCTCACGCCTCGTCTCTATGATTATTTGCTCCAAAATGTTCGAGAACCAGAGATTCTAAGGCAACTGCGAGTGGAGACCGCCTCTATGCGCGGAAGTCAGATGCAGGTGTCTCCTGATCAGGCACAGCTACTTGCAATGCTTGTGCAGATTCTTGGAGCTGAAAGGTGTATTGAAGTCGGTGTTTATACTGGTTACTCATCACTAGCCATAGCATTAGTCCTGCCAGAATCAGGTCGGTTAGTTGCCTGTGAAAGAGATGCCAAATCTCTTGAGGTTGCTAACAAGTATTATCAACTTGCTGGTGTTTCACATAAGGTTGATGTAAGACTCGGACTTGCAGCGGATTCCCTAGAATCTCTAATTATGAATGGTGAGGTAGGAAGCTATGACTTTGCATTTATTGATGCTGAGAAAAGGATGACTGAGAAATATTTTGAGATGCTACTACAACTGGTGAGGGTTGGAGGTCTTATTGTAATTGATAATGTCCTTTGGCATGGAAAAGTTGTTGATCCATTGGTAAGTGACTCTAAAACTAACAGCATTCGATATTTTAATCAACGGTTAATGGGAGACAAGCGTGTAAGCATCAGTATGGTGCCTATTGGAGATGGGATGACAATCTGTCGGAAAAGATGA 879 0.4266 MASSGMNLVFHHVSTTSLAKPIRLCASSHLLSPTQPVTTTSKALCRRCSCKLKRLAVRSCSITEFVVSSDEKYGNKQVISLTPRLYDYLLQNVREPEILRQLRVETASMRGSQMQVSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAIALVLPESGRLVACERDAKSLEVANKYYQLAGVSHKVDVRLGLAADSLESLIMNGEVGSYDFAFIDAEKRMTEKYFEMLLQLVRVGGLIVIDNVLWHGKVVDPLVSDSKTNSIRYFNQRLMGDKRVSISMVPIGDGMTICRKR 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08266 292 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 75 292 IPR002935 GO:0008171
Vifa1g08266 292 Pfam O-methyltransferase 93 291 IPR002935 GO:0008171
Vifa1g08266 292 CDD AdoMet_MTases 135 240 - -
Vifa1g08266 292 Gene3D Vaccinia Virus protein VP39 67 292 IPR029063 -
Vifa1g08266 292 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 86 292 IPR029063 -
Vifa1g08266 292 PANTHER O-METHYLTRANSFERASE-RELATED 75 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08266 Vifa-Chr1 1291499912 1291502664 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08266 49 280 Monolignol Biosynthesis Gene Families AT3G62000 74.894 7.05e-127 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08266 - - gmx:100776619 424.476