Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08247 ATGGCAAACGAGGTTGTTGTTTTGGATAAATGGGCTAGCATGTATGGGATGAGAGTTAGGATTGCATTAGCTGAAAAAGGTATTAGCTATGAATCCAAAGAAGAAGATTTTAATAATAAGAGTGATTTGCTTCTTCAATCTAACCCTATTCACAAGAAGATTCCAGTTCTTATCCATAATGGTAAGTCCATTTCTGAATCTGGAATTATTGTCCAGTACATTGATGAGGTTTGGAATCACAAAAATCCATTCTTTTCCTCTGACCCTTATGAGAGAGCTCAAGCCAGATTTTGGGTTGATTATATTGACAAAAAGGTTTTTGCTACTTGGATGAAAGTGTGGCTTTCAAAAGGTGAAGAATATGAGGAAGCTAAGAAGGAGTTGATCTCTATCTTTAAGACACTAGAGGAGACATTAGGTGACAAGAGTTTTTATGGTGTGGAGACTCCTAAACTTGTGGCTTGGGGAAAGAGATGCATTGAGAAAGAAAGTGTTTCAAAATCACTTCCTGATGAGAACAAGATATATGAATATGTTGTGGCTGGCAAGAAAGCACTTGGGTATGATGATTAG 573 0.37 MANEVVVLDKWASMYGMRVRIALAEKGISYESKEEDFNNKSDLLLQSNPIHKKIPVLIHNGKSISESGIIVQYIDEVWNHKNPFFSSDPYERAQARFWVDYIDKKVFATWMKVWLSKGEEYEEAKKELISIFKTLEETLGDKSFYGVETPKLVAWGKRCIEKESVSKSLPDENKIYEYVVAGKKALGYDD 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08247 190 Gene3D - 149 189 - -
Vifa1g08247 190 CDD GST_C_Tau 89 181 IPR045074 GO:0004364|GO:0006749
Vifa1g08247 190 SFLD Main (cytGST) 2 148 - -
Vifa1g08247 190 CDD GST_N_Tau 5 78 - -
Vifa1g08247 190 FunFam Tau class glutathione S-transferase 1 87 - -
Vifa1g08247 190 SUPERFAMILY GST C-terminal domain-like 76 181 IPR036282 -
Vifa1g08247 190 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vifa1g08247 190 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 146 IPR045073 -
Vifa1g08247 190 Pfam Glutathione S-transferase, N-terminal domain 7 76 IPR004045 -
Vifa1g08247 190 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Vifa1g08247 190 Gene3D - 88 148 - -
Vifa1g08247 190 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 190 IPR010987 -
Vifa1g08247 190 SFLD Main.3: Omega- and Tau-like 2 148 IPR045073 -
Vifa1g08247 190 Gene3D Glutaredoxin 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08247 Vifa-Chr1 1287667445 1287668183 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08247 1 184 Glutathione S-transferase Gene Family AT1G78380 54.673 2.93e-79 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08247 K00799 - gmx:547950 276.559