Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08242 ATGGCAGATGAGGTGATCCTGTTAAATTTCTGGCCAAGTCATTATGGCATGAGGGTCCTAATTGCACTTGAGGAAAAGGGTATCAAGTATGAGAACAAAGAAGAGGATTTTAGCAACAAGAGTCTTTTACTCTTGCAAACGAACCCAATTCACAAGAAAATACCCGTTCTAATTCACAATGGAAAATCCATTTGTGAATCACTAAATATAGTTGAATATATTGATGAGGTTTGGAATGATCATTCTCCTTTGTTTCCTTATGATCCTTACCAAAGAGCCCAAGCTAAATTTTGGGCTAACTATGTTGACACTAAGATATATGAGATTGGATCTAGGTATGCAAAAACTGTAGGAGAAGAGAAAGAAACTGCAAAGAAAGAGTTGCTTGAAAGTTTTGAAGTGATGGAAGAACAGCTGGGAGACAAGCCTTATTTTGGTGGAGACAAGTTTGGTTTTGTGGATGTGGCACTTGTTCCATTCTTTTGCATGCTATATACTTACACTTTTGCTGGCAAATTCATTGATGATGAAGAATTCCCAAATTTGACATCTTGGGCCAAAAGGTGTGCTAAAAAAGAGAGTGTATCTAGGTCAATTCCTCATGAGAATAAGATGAAACATTTTTTAGAAGAGAAAAGTCTTTTGAATCGTGGAGATTAG 660 0.3667 MADEVILLNFWPSHYGMRVLIALEEKGIKYENKEEDFSNKSLLLLQTNPIHKKIPVLIHNGKSICESLNIVEYIDEVWNDHSPLFPYDPYQRAQAKFWANYVDTKIYEIGSRYAKTVGEEKETAKKELLESFEVMEEQLGDKPYFGGDKFGFVDVALVPFFCMLYTYTFAGKFIDDEEFPNLTSWAKRCAKKESVSRSIPHENKMKHFLEEKSLLNRGD 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08242 219 SFLD Main (cytGST) 2 211 - -
Vifa1g08242 219 Gene3D Glutaredoxin 1 87 - -
Vifa1g08242 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Vifa1g08242 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Vifa1g08242 219 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Vifa1g08242 219 Gene3D - 88 215 - -
Vifa1g08242 219 CDD GST_N_Tau 5 78 - -
Vifa1g08242 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vifa1g08242 219 CDD GST_C_Tau 89 205 IPR045074 GO:0004364|GO:0006749
Vifa1g08242 219 Pfam Glutathione S-transferase, C-terminal domain 118 191 IPR004046 -
Vifa1g08242 219 SUPERFAMILY GST C-terminal domain-like 76 209 IPR036282 -
Vifa1g08242 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 205 IPR045073 -
Vifa1g08242 219 FunFam Tau class glutathione S-transferase 1 87 - -
Vifa1g08242 219 SFLD Main.3: Omega- and Tau-like 2 211 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08242 Vifa-Chr1 1287077205 1287078146 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08242 1 211 Glutathione S-transferase Gene Family AT1G78370 54.028 8.82e-86 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08242 K00799 - gmx:100776076 295.819