Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08215 ATGGAGGGAACATTTGTTTCTTCCAAGCCATGTGCTAAAGAAAATAGCATTGATTTAACTCAAATCACACTGCGACCCTTTAATCTTACTGACCTCGATGATGTTATGGAGTGGACAACTGATGAAAAAGTGGCCAAGTTCTGCTCTTGGGAACCTTACACCAGCAAAGATCAAGGTATCAGCTTCATTGAAGATACAGAAAGCAAGTTTCTATGTTGCAAAGCGATATGTCTTGATGATCGTGCTATTGGGTGTATTATGATGTTCTCACCTGATGATAAATGTAGAAACAAAACTGCAGAACTTGGCTATCATCTAGGCTCTAAATACTGGGGTAAAGGGATTGCTACATGTGCTGTGAAACAAATTGTTAATTTTGCATTCAGTGAATTGCCATACTTGGAAAGGCTTGAAGCTCTGGTTGATGTGGAAAATGTTGGGTCTCAAAGAGTGTTGCAGAAAGCTGGTTTCAAAATGGAGGGAGTTCTCAGAAAGTATTTGTTCATGAAAGAAAAAAGTAGAGATATGATTATGTTCAGTGTTCTTTCAACTGATCTCTAA 561 0.3832 MEGTFVSSKPCAKENSIDLTQITLRPFNLTDLDDVMEWTTDEKVAKFCSWEPYTSKDQGISFIEDTESKFLCCKAICLDDRAIGCIMMFSPDDKCRNKTAELGYHLGSKYWGKGIATCAVKQIVNFAFSELPYLERLEALVDVENVGSQRVLQKAGFKMEGVLRKYLFMKEKSRDMIMFSVLSTDL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08215 186 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 18 185 - -
Vifa1g08215 186 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 22 175 IPR000182 GO:0016747
Vifa1g08215 186 Pfam Acetyltransferase (GNAT) domain 22 158 IPR000182 GO:0016747
Vifa1g08215 186 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 22 182 IPR016181 -
Vifa1g08215 186 Gene3D - 14 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08215 Vifa-Chr1 1283811199 1283811759 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vifa1g08215 Acetyltransf_3 4.7e-28 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08215 - - cam:101514530 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g08215 1 1283811199 1283811759 Vifa1g08215 1 1283811199 1283811759 ECH