Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08211 ATGGAGGGAACTTTAATTTCTTCCAAACCATATCCCAAAGAAGAGAAAATTGATTTGAACCAAATCACACTCCGACCCCTTCATCTTTCTGATCTTGATGATGTCATGGTATGGACTACTGATGAAAAAGTGACCAACTTCTGCTCTTGGGAACCTCACACCAGCAAAGATGAGGGCATAAATTACATTGAAAATATAGCAACCAAATTTCTATGGTGCAAAGCAATATGTTTTAATGATCGTGCTATTGGATGTGTTTCTTTGTCCTCGAGCTCACCTCATGATAAAAGCAGGAACAAAACTGCAGAACTTGGTTATGTTCTAGGTTCTAAATACTGGGGTAAAGGAATTACCACATGTGTTGTGAAACAAGTTATTAAGATTGCATTCACTGAGTTTTCACACTTGGAAAGGGTTGAAGCTCTTGTTGATGTGGAAAATGTTGGGTCTCAAAAAGTGTTGGAAAAAGCTGGTTTCCAGAAGGAGGGAGTTCTCAGGAAGTATCTGTTCATGAAAGAAAAAAGCAGAGATATGGTCATGTTCAGTGTTCTTTCTAATATTACTTAA 567 0.3774 MEGTLISSKPYPKEEKIDLNQITLRPLHLSDLDDVMVWTTDEKVTNFCSWEPHTSKDEGINYIENIATKFLWCKAICFNDRAIGCVSLSSSSPHDKSRNKTAELGYVLGSKYWGKGITTCVVKQVIKIAFTEFSHLERVEALVDVENVGSQKVLEKAGFQKEGVLRKYLFMKEKSRDMVMFSVLSNIT 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08211 188 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 22 177 IPR000182 GO:0016747
Vifa1g08211 188 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 18 186 - -
Vifa1g08211 188 Pfam Acetyltransferase (GNAT) domain 22 160 IPR000182 GO:0016747
Vifa1g08211 188 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 21 184 IPR016181 -
Vifa1g08211 188 Gene3D - 11 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08211 Vifa-Chr1 1283063148 1283063714 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vifa1g08211 Acetyltransf_3 1.1e-26 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08211 - - cam:101514530 300.827