Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08164 ATGGCCGGTGTTGACGGTGTTGTCGGGGGCTCCGTTCTTGTCCGCGAGGTTGTTGTTGGCATTGACGACGCAAATGTTCTGATCACACACAGAGAAAGCGAGCTGAAGAGAGAAAAGAAAAGAACAGGATTTATAAAATTGTCGCAATACTTGAATTCCACAACGCAGATTTTCGCGACTCCGAACCGTATCCCCTTTGCTGAAGTATTGAGAAGGAGTTTTTCAGATGCTAATCGTTATGATGCGCGTGGTTACATGCTGAGAAAACAAAGGTATCACTTGAATCTGGAAAGAAGTTTGTCTTACGTGATTCAGAATAGTAATATGAGGCTTGAATCAGGGACTTGTAATGTGTGTTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCCGGCAGAAGAGTATTCTGATGAAAACGGCTGCTCAGGGGAGGCTGGTCAGAGTTCTATGAATGAGGGTAATGTACATTCTCTTAGTAGCAGAGCTTGTGAAAACTTGCAGCTTGATGTCAGTGAAACAAGTAATATGCTCAGTATTAATTCAAATCATGATTCTCTATCTGAAAATGCCGAGAGTAGACAGATCTTGATGAATAAGTATCAGGATTCCAAGCATTTAGAAGGTCATGATGACAACACATCTTGTATCAGTAGAGCATCTGATGCCAATTTAGTAAAGGATAGCCATCAAATGAATGCAGACAGAATAAATATACCTTGTAGTTCAGCTTCAGCTAGTCATTTTGGGGCGGAACAATCTGTAATTGCTTCTAAAGATGGAGACACTGATCATAGTTCACCTATGGTACAAAGGCAGCATGGACAATCTCAAAATGATAAATCTCTTTCAGATAATCCAAGCTTAATACACATCGAAAGGGACTTGAATTCTCAGATACCAGAAAAAATTTCAGAATGCTCTATAGAGAATTGCAGTTCATCATTAACCAAAGAGAGTGCACCCGTTGTTGTTTCTGTTGAGAAATGTGCTACAAATAAGGATAAACTTATTGACGACACTTCCAATGTTTCACTAAAAGTATGTCCAAAGTCACAAGCAGATCCTGATAATGATGTTTCTGATGCTAAAGTTGAAGACTCAAAATGTTTGGTCCATTATGTACATCATGAGAAAGCGGAAGAGCTGATTAAATCACCTGGCAAGCAGGAATCTCAATCTGAAAATGAGAGTGACGAATCAGATGTTGTGGAACATGATGTGAAGGTGTGTGACATCTGTGGAGATGCTGGTCGTGAGGATCTACTTGCCATATGTTGTAGGTGCACTGATGGTGCAGAGCACACCTACTGCATGCGAGAAATGCTTGAGAAACTCCCAGAAGGGGATTGGTTCTGTGAAGAATGCCAAGAAGCAGTGGAAGCTGAAAACAAGAGGCTGGATGCCGAAGAAAAAAAAATCATAAAAACTACTTCCATGTCACAAGTTTCCGGCAAAAGACTTTCTGACAACATTGAAGTGGCTTCTCCAGCAGCAAAAAGGCAAACTCTTGAATCAAGCAAAGGATCACCAAAGGCGTCAAGCCCCAAGAAATTGGTTCCACTGTCACGAGAATCTTCATTTAAGAGCTCAGATAAATTAAAAGGAAAGTCTGGTCTTCTGACGCCTCTCCGAAACCTCTCTGGTGGGGATGATACACATCCTGCTCGATCTTCTTCTATTGGTCCCCGGGGTCAAATTTCGAAGAGTATGTTATTGAAGTCTAATTCATCCAATAACTTAAATTCCAAGCCTAGAGTCAAAATTGTTGATGAAATATTTCCACCAAGACCAAAAGGAGGTAGTGAACAAACTTCTAAGAATGTGGAGCCATCTCCTCGGATGACAAGTAGGTCGACATTATTCAAATCCTCAAGTTTGGGGCGATCAAGTGCAATTGAATCTAAAGTTAAAATGCTTTCACCCAAGTCTGCAACTACTCAGGACGTGAAAGGCTCTAGACATTTAAAAGAATCAGGTTCATTTGATCGAAAATATCTGTCTAAGAATGACCGGCATGTGGCTAGTTCTGCTGTTTCCGCACCTAAGGGTGATCAGAAGCTTACACCTCGGGGTGAAGCCATCATTAAACCTTCAGCAGTTAATAATCGAGAGTTGAAAATTAACCAGGATGGAAAATTGAATGTGCCATCAAAGTCAATGAACAATATAAGCCGTAAAAGTTTGGAGCCTCAAGGTAGTTCAGAGAGAACATCATCCAGTAATGATGAAGCTGTGCAGGATACACTGCCTCGATCTCGAGAGACAGCAAATCAGGTTGAGAAATCCAGAGAGAGTCTTAGTAACCGTGTAAGACCAGTTGTTCCCACTGCACTAAAAAGTCCATTTTGTCAAAAATGTGAGGAATTTGGCCATTCTATAGAATGCTGCATAGTTGGTCTACAAGAATCTGGTGCTGAATTATCTGTCACCACTTCAAGTATCTCAAAAGAGGAGGTGCATAAAGACAATAAACTGAAAGCTGCAATCCAGGCGGCTGCTTTACTTAAAAGACAAATTTACAGGAAGAAAGAAGTATCCAGTCAAATTGATGAAATTTCTACATTAGGCACAGAGTTGAATTGTGAAGTGACTTCACAAGACCAAGTGTCGGTTTCTAACACTCTCAAGAATAGTATATCTACTGAAGAAACTCATGAACAGCAGGAAGTCCTTGAAAATTCTACATCCGATTCTTCCAAATGTACATCTGCCAGCGATTTGAAGAAACTTAACTCTAGCTCAACTGATCTTTGTTCCCAACTAGGAAAATCGGGTTTAGTTGATTTTAATGCTCTAAAGCCTTTATTGGGAGAGCTGTCTAAAAATGACGTGGCAATCTCAAATGTTCTTTCGAAGATGTTGGCCTTTCCTGAATACGATTACATATGGCAGGGTGTCTTTGAAGTGCATAGAAATGAAAAGTCTCCAGAATTATATACTGGAGTTCAGGCACATTTATCATCTTCTGCATCTCCTAAGGTCCTTGAGGCACTGACCAAGTTTAGTCCCGAAGTTTCTCTCATCGAAGTTTCTCGCTTGAGCACATGGCCGTCACAATTTCATCATGGTGGTGTTAGAGAAGATAATATTGCTCTTTATTTCTTTGCCAGGGATGTTGAGAGCTATGAGAGACACTACAGGGGACTATTGGATCACATGATTCAAAATGATTTAGCACTTAAAGGAGTTTTTGATGGTGTTGAACTTCTCATATTCCCATCCAATCAGCTTCCGGAAAGTTCACAGCGCTGGAATATGTTGTTTTTCTTATGGGGTGTATTTAGGGGGCGGAGGACCAATCATTCAGGTTCTGCAAAAAAGATCTGTATTCCAAGTTTGAATGCATTGCCAGTTGAGGAAAATTCTTCAACTGCTGATGTGATGTTGTCTGAGCATTTTTTGTCAAAGGGCATCAATGAAAAATCAATTAATTCTGACAAAGCATGCAATGCACTTCCTTTGTTCACTTCCATAGATCAATCTTCGTTTACTGTGAGTAGGAATACTGATATCAATCGCCAGACACATTTGTGTTCACAAGAAGTAAGCTTAGAGAAGCCAGATGGTAGAATCGATAGCAAAGCTTCATCAAGGGTTCCAAAAAGCTGTAACCATTTATATCAACCAACGAAATCTGCTGTTTCATCCCTGGAAGCTAGTGTACTAGAGGATGAACGGTGCAGAGAGTCTAAACCTTCTGAAGAATTGGGAACAGGTGTAAGTAGCAAGATGGTGGAAGCAAAAACTGATTCTGCTATTTCTGACAAGCAAGGGAATACCCTCTGTTGGGAAATTCCTTCTGTTAGCCAACAAGAAAGAGATGCTGCCTACAATATTAGTAAAAATGAACTTATGGAGAGAACGAAATATGATGAAGATCAGCAAAGGACCAAGAGGAAACAGAAAGAAGATTGTCCCTATATTAATTTGGAGGAAACTATCGAGAATTACGAATCATGTGCTGCAAGCAATATTGTTAAGGATAAAGCTTCAGAAAGAATGAACGTTGATGATCAGCAAAGGCCTAAGAGGAAACAGAGAGATGGTCTTTACATTGACTTGGAGGCAGCTGTTGAAAATCAAGGAATAGATGCTGCAATCAATATAACTAAGGATAAACCTTCAGAGAAGATGGAAGATGATGAAGATCAGCAACGGCTTAAGAGGAAAGCAAAAGATCGTCACTATATTGACTTGGAGGCTCCTCTACAGGAAGACATGTCTTCCGAAGGGGTCGAGTACCAGCTACCCAATGATAAAGAAGTTCATCATGTTGATCTATCAGTAGTTGGCTGTCCAAAAATGCTTTGGAATGAGGTAAATGAGAAATTAGAAGATGGAGAAGGTTCCAGAAAGAAATTAAGGACAAGTTTTGGCGGGACTTCTGGACTTCATAGTTCTGGAGGAAGAGACTCATTTAATGGCAGTTTGGCATCTCTTGGAAATGATCTTGGTTCTTGTTCTTCAGTCGAGGACAAAGGATGTGAAGTAGCTTCCAATGAAAAAATCATCCGCGAGGACTTTGGAACGATGGTAAGAACCTTCTTTCCTGTTGATACTCAGAATACCAATGGCTCACAATTGGGACAGAATACAATGTCATTGAAAGGGATTCATGCCCGCGAGGGCGTGATTCCAAATCTAAATCTTGCTTTAGGGGAAGAAACAGAAGTGCCGTTGCCCCATCCTCCTCCTGCCGCTCCTAAGGGTATGTTGCCGCCTTTCCTAGTTGGGGCTGTAGACAAGAAAAATAACCGTCCAGAAAGTTTGGCAGATGGGCTAGAAGACGACGTTGCTGCTGCTTCACTTTCCCTTTCTCTATCGTTTCCATCTTCAAAGGAAAACACACAAACTTCTTCAAAAGCAGAGCTTTTACCTGATGGTCACAGTGTGAAACCCCCTTTTCTCCTTTTTGGGAGATACACAGACAAATAA 4935 0.4081 MAGVDGVVGGSVLVREVVVGIDDANVLITHRESELKREKKRTGFIKLSQYLNSTTQIFATPNRIPFAEVLRRSFSDANRYDARGYMLRKQRYHLNLERSLSYVIQNSNMRLESGTCNVCSAPCSSCMHLNPAEEYSDENGCSGEAGQSSMNEGNVHSLSSRACENLQLDVSETSNMLSINSNHDSLSENAESRQILMNKYQDSKHLEGHDDNTSCISRASDANLVKDSHQMNADRINIPCSSASASHFGAEQSVIASKDGDTDHSSPMVQRQHGQSQNDKSLSDNPSLIHIERDLNSQIPEKISECSIENCSSSLTKESAPVVVSVEKCATNKDKLIDDTSNVSLKVCPKSQADPDNDVSDAKVEDSKCLVHYVHHEKAEELIKSPGKQESQSENESDESDVVEHDVKVCDICGDAGREDLLAICCRCTDGAEHTYCMREMLEKLPEGDWFCEECQEAVEAENKRLDAEEKKIIKTTSMSQVSGKRLSDNIEVASPAAKRQTLESSKGSPKASSPKKLVPLSRESSFKSSDKLKGKSGLLTPLRNLSGGDDTHPARSSSIGPRGQISKSMLLKSNSSNNLNSKPRVKIVDEIFPPRPKGGSEQTSKNVEPSPRMTSRSTLFKSSSLGRSSAIESKVKMLSPKSATTQDVKGSRHLKESGSFDRKYLSKNDRHVASSAVSAPKGDQKLTPRGEAIIKPSAVNNRELKINQDGKLNVPSKSMNNISRKSLEPQGSSERTSSSNDEAVQDTLPRSRETANQVEKSRESLSNRVRPVVPTALKSPFCQKCEEFGHSIECCIVGLQESGAELSVTTSSISKEEVHKDNKLKAAIQAAALLKRQIYRKKEVSSQIDEISTLGTELNCEVTSQDQVSVSNTLKNSISTEETHEQQEVLENSTSDSSKCTSASDLKKLNSSSTDLCSQLGKSGLVDFNALKPLLGELSKNDVAISNVLSKMLAFPEYDYIWQGVFEVHRNEKSPELYTGVQAHLSSSASPKVLEALTKFSPEVSLIEVSRLSTWPSQFHHGGVREDNIALYFFARDVESYERHYRGLLDHMIQNDLALKGVFDGVELLIFPSNQLPESSQRWNMLFFLWGVFRGRRTNHSGSAKKICIPSLNALPVEENSSTADVMLSEHFLSKGINEKSINSDKACNALPLFTSIDQSSFTVSRNTDINRQTHLCSQEVSLEKPDGRIDSKASSRVPKSCNHLYQPTKSAVSSLEASVLEDERCRESKPSEELGTGVSSKMVEAKTDSAISDKQGNTLCWEIPSVSQQERDAAYNISKNELMERTKYDEDQQRTKRKQKEDCPYINLEETIENYESCAASNIVKDKASERMNVDDQQRPKRKQRDGLYIDLEAAVENQGIDAAINITKDKPSEKMEDDEDQQRLKRKAKDRHYIDLEAPLQEDMSSEGVEYQLPNDKEVHHVDLSVVGCPKMLWNEVNEKLEDGEGSRKKLRTSFGGTSGLHSSGGRDSFNGSLASLGNDLGSCSSVEDKGCEVASNEKIIREDFGTMVRTFFPVDTQNTNGSQLGQNTMSLKGIHAREGVIPNLNLALGEETEVPLPHPPPAAPKGMLPPFLVGAVDKKNNRPESLADGLEDDVAAASLSLSLSFPSSKENTQTSSKAELLPDGHSVKPPFLLFGRYTDK 1644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08164 1644 MobiDBLite consensus disorder prediction 381 401 - -
Vifa1g08164 1644 SUPERFAMILY FYVE/PHD zinc finger 396 459 IPR011011 -
Vifa1g08164 1644 MobiDBLite consensus disorder prediction 600 631 - -
Vifa1g08164 1644 MobiDBLite consensus disorder prediction 551 584 - -
Vifa1g08164 1644 MobiDBLite consensus disorder prediction 257 285 - -
Vifa1g08164 1644 MobiDBLite consensus disorder prediction 1455 1470 - -
Vifa1g08164 1644 MobiDBLite consensus disorder prediction 477 768 - -
Vifa1g08164 1644 PANTHER - 407 1119 - -
Vifa1g08164 1644 MobiDBLite consensus disorder prediction 702 753 - -
Vifa1g08164 1644 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 392 483 IPR013083 -
Vifa1g08164 1644 MobiDBLite consensus disorder prediction 877 898 - -
Vifa1g08164 1644 MobiDBLite consensus disorder prediction 1445 1470 - -
Vifa1g08164 1644 MobiDBLite consensus disorder prediction 381 395 - -
Vifa1g08164 1644 MobiDBLite consensus disorder prediction 267 285 - -
Vifa1g08164 1644 Coils Coil 452 472 - -
Vifa1g08164 1644 MobiDBLite consensus disorder prediction 1606 1644 - -
Vifa1g08164 1644 MobiDBLite consensus disorder prediction 649 670 - -
Vifa1g08164 1644 MobiDBLite consensus disorder prediction 1606 1624 - -
Vifa1g08164 1644 MobiDBLite consensus disorder prediction 1370 1392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08164 Vifa-Chr1 1275096229 1275112499 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08164 406 461 C2H2 Transcription Factor Family AT3G01460 36.508 3.96e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08164 - - gmx:100806639 1749.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g08164 1 1275096229 1275112499 Vifa1g08164 1 1275096229 1275112499 ECH