Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08104 ATGCAAGCTGCATATAAAATCTATTTCCAAGATGAAGGTGAAAAGTTTACATTTGAGGCTGCATGGAGATTATTGAAAGATGAACCTAAATGGCTCGCAGGTTCACCCGAAGCTTCTACAAAAAGAAGAAGAAATTCGGCTTCAGGAGCATATTCTTCGCCTTTTAATCCATTAACACCAACAAGCAGTGAATACGATCCATCATCACCTACTTTGTCAGGTCGTCCAATTGGTCAAAAGGCAGCCAAAAGGAAGGAGAAAGAAAAGCTTCTGGAAATGTCTTCTACACCCAATGTCAAATATGGTTCTTTGAAAGATGACTTAAAAATGAAAATTGATCTGATGTCAATGTTTGCACAGGACTATGCACGCATTGAGGGTGAAAAACTTGAGGTAGAGAGAAAAAAGGTTGATGCAAAGATTAAGAAGGCTGAGATTGTTGAGGAAAGATTAAAGATGAATGATCTACAAATACTCTCAAAAGATACATCAAATATGGATGCAAGACAACTACAAGCTCATGAAATATTGTGCGGCATGATTAGAGAAAAATATGGAATTAATTAG 567 0.3686 MQAAYKIYFQDEGEKFTFEAAWRLLKDEPKWLAGSPEASTKRRRNSASGAYSSPFNPLTPTSSEYDPSSPTLSGRPIGQKAAKRKEKEKLLEMSSTPNVKYGSLKDDLKMKIDLMSMFAQDYARIEGEKLEVERKKVDAKIKKAEIVEERLKMNDLQILSKDTSNMDARQLQAHEILCGMIREKYGIN 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08104 188 MobiDBLite consensus disorder prediction 33 91 - -
Vifa1g08104 188 PANTHER - 1 183 - -
Vifa1g08104 188 Pfam No apical meristem-associated C-terminal domain 15 170 IPR029466 -
Vifa1g08104 188 MobiDBLite consensus disorder prediction 39 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08104 Vifa-Chr1 1266061731 1266062297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08104 1 87 Glutathione S-transferase Gene Family AT5G41240 31.915 1.13e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08104 - - mtr:11446189 190.274