Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08091 ATGGAGGGCATCAAGAAAAGACTCTTTAGTTCATCAATTTCACCAACAATGTTGTTTCTCTCTCTAGGTTTTGCTATTCTTCTCATGCTACCAATGGCATCAGCCTCAAGGATTTTGGTCGGTGGAAGCAAAGGTTGGAACACAAATTTCAACTACACTACTTGGGCTAAGGACAAGCATTTCTACAATGGTGATTGGCTTTTTTTTGTGTATGATAGGAACCAAATGAATGTACTTGAAGTAAACAAAACAGATTATGAAACATGCAACTCAGATCATCCACTTCACAACTGGACAACTGGAGCTGGAAGAGATGTTGTTCCATTGAATGTGACAAGACATTACTATTTCATAAGTGGCAAAGGATTTTGTTTTGGTGGAATGAAAATAGCTGTTCATGTTGAAAATCTACCTCCACCACCAAAAGTATCACCTATAAAATCTTTTGCACCAACTCTTAGAGGCCATAGTCTCCTTCTCATGCCTATTGTTTTTGCTATTGGAGCAGCTTGGGATTCATTCATTTATTTATGGTAA 537 0.378 MEGIKKRLFSSSISPTMLFLSLGFAILLMLPMASASRILVGGSKGWNTNFNYTTWAKDKHFYNGDWLFFVYDRNQMNVLEVNKTDYETCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISGKGFCFGGMKIAVHVENLPPPPKVSPIKSFAPTLRGHSLLLMPIVFAIGAAWDSFIYLW 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08091 178 FunFam Lamin-like protein 34 137 - -
Vifa1g08091 178 ProSiteProfiles Phytocyanin domain profile. 36 136 IPR003245 GO:0009055
Vifa1g08091 178 Pfam Plastocyanin-like domain 46 128 IPR003245 GO:0009055
Vifa1g08091 178 PANTHER BLUE COPPER PROTEIN 37 135 IPR039391 GO:0009055
Vifa1g08091 178 Gene3D - 34 137 IPR008972 -
Vifa1g08091 178 SUPERFAMILY Cupredoxins 35 134 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08091 Vifa-Chr1 1264444615 1264445940 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08091 16 178 Phytocyanin Superfamily AT5G15350 52.381 6.91e-62 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08091 - - mtr:11412511 321.242