Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08086 ATGGAAAATTCAAAAGTGATTTTGATGGTGATTTTGGGAATGTTATCATTGTGGCCAATGGTGGTTATGGGAAGTCCAAAGCTTCATAAGGTGGGAGGTTCCAAAGGTTGGAATGAAAAAAGCAATTATACTCAATGGTCTTCTCAACAACATGTCTATGTTGGTGATTGGTTAATTTTTGTGTTTGACAAAAGATACTACAATGTCTTGGAAGTGAGCAAGACATCCTATGAGAATTGCATAGACAGGAACTTCATGAAAAATGTAACACGAGGTGGTCGCGATGTGGTTCAGTTGATAGAAACAAAGACGTACTACTTTATTAGTAGTGGAGGTTATTGTTTTCATGGAATGAAAGTTGCTATACACATTCAAGAACATCAAACACCGGCACCATCTCCTTCTCTGTCAGATATAAAATCGGATGGCGAATTTATTTCGCCATCAATGTACACATACTTTAGGATTATTGTTGTTAATGTGGTTTATGTGAGTTTGGTTTTCATGGGGATTTTCTAA 519 0.3661 MENSKVILMVILGMLSLWPMVVMGSPKLHKVGGSKGWNEKSNYTQWSSQQHVYVGDWLIFVFDKRYYNVLEVSKTSYENCIDRNFMKNVTRGGRDVVQLIETKTYYFISSGGYCFHGMKVAIHIQEHQTPAPSPSLSDIKSDGEFISPSMYTYFRIIVVNVVYVSLVFMGIF 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08086 172 ProSiteProfiles Phytocyanin domain profile. 27 126 IPR003245 GO:0009055
Vifa1g08086 172 PANTHER BLUE COPPER PROTEIN 28 127 IPR039391 GO:0009055
Vifa1g08086 172 FunFam Lamin-like protein 25 127 - -
Vifa1g08086 172 SUPERFAMILY Cupredoxins 27 124 IPR008972 -
Vifa1g08086 172 Gene3D - 27 134 IPR008972 -
Vifa1g08086 172 Pfam Plastocyanin-like domain 37 118 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08086 Vifa-Chr1 1263591624 1263593543 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08086 20 152 Phytocyanin Superfamily AT2G27035 43.284 1.67e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08086 - - gmx:100788336 203.371