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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vifa1g08067
ATGGTCCACCCTATCCTCCACCATGTCTTGCCTAAAACCCCTTTGACTCTCAAAATCTTCAACCTATATAAACACTTACCACTTCACCATTTTCTGACACAATCCACTTCTTTGCCACCACTCACACTAGCTATAAACAATATACATAAAGTTTTTCTTTCTTCAAAGATGAATTGGAGTAATTCAACAAGTGATGGTAATAGCAACAAGAAGTTTAAGGGAGTTAGACAAAGAAAATGGGGGAAATACGTATCGGAGATTCGTGTTCCGGGGACTCAAGAACGTTTATGGTTGGGAACTTATGCTACACCGGAAGCTGCTGCGGTTGCACATGATGTCGCTGTTTATTGTTTGAAGAGACCTTCTACGTTGGACAAACTCAACTTTCCTCAGATTTTGTCTTCTTATTGTATCCAACAGAGAGATGGTTTGATGTCTCCTAGGTCTGTTCAAAAGGTTGCTTCTGATGTTGCTATGGATGTTGATGCTAGAAACATTGCAAACCAAACGACAACAACTTTGGATCAATCTCATCATGCCCACAATGTTGTTGCTGATGATGATGTGTGTTGGTGGGAAGGTTTGGGTGGTGATGATCAAGGAATGACACAAGTTTCTAACCAACAAGAAGGATTGAGCATTTCCATTGAAGATTATCTATAA
663
0.3997
MVHPILHHVLPKTPLTLKIFNLYKHLPLHHFLTQSTSLPPLTLAINNIHKVFLSSKMNWSNSTSDGNSNKKFKGVRQRKWGKYVSEIRVPGTQERLWLGTYATPEAAAVAHDVAVYCLKRPSTLDKLNFPQILSSYCIQQRDGLMSPRSVQKVASDVAMDVDARNIANQTTTTLDQSHHAHNVVADDDVCWWEGLGGDDQGMTQVSNQQEGLSISIEDYL
220
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vifa1g08067
220
PRINTS
Ethylene responsive element binding protein signature
72
83
IPR001471
GO:0003700|GO:0006355
Vifa1g08067
220
PRINTS
Ethylene responsive element binding protein signature
94
110
IPR001471
GO:0003700|GO:0006355
Vifa1g08067
220
Pfam
AP2 domain
71
119
IPR001471
GO:0003700|GO:0006355
Vifa1g08067
220
SUPERFAMILY
DNA-binding domain
71
130
IPR016177
GO:0003677
Vifa1g08067
220
CDD
AP2
70
105
IPR001471
GO:0003700|GO:0006355
Vifa1g08067
220
ProSiteProfiles
AP2/ERF domain profile.
71
130
IPR001471
GO:0003700|GO:0006355
Vifa1g08067
220
PANTHER
ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED
61
178
-
-
Vifa1g08067
220
SMART
rav1_2
71
136
IPR001471
GO:0003700|GO:0006355
Vifa1g08067
220
Gene3D
AP2/ERF domain
70
132
IPR036955
GO:0003700|GO:0006355
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vifa1g08067
Vifa-Chr1
1260996765
1260997427
Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vifa1g08067
57
220
AP2-EREBP Transcription Factor Family
AT1G22810
43.902
4.32e-38
127
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
AP2/ERF-ERF
Vifa1g08067
AP2
1e-09
CL0081
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vifa1g08067
-
-
mtr:11437172
252.292
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